Difference between revisions of "Tiso gene 9504"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Tiso_gene_9504 == * right end position: ** 3786 * transcription direction: ** NEGATIVE * left end position: ** 1799 * centisome position: ** 19.3816...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15124 RXN-15124] ==
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== Gene Tiso_gene_9504 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3786
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* transcription direction:
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** NEGATIVE
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* left end position:
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** 1799
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* centisome position:
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** 19.3816   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDROKAEMPFEROL-4-REDUCTASE-RXN]]
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** 1 [[2-AMINOACRYLATE]][c] '''=>''' 1 [[CPD-16015]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 2-aminoprop-2-enoate[c] '''=>''' 1 2-iminopropanoate[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-1101]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* Reaction: [[RXN-1106]]
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* [[PWY0-1535]], D-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535]
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** Source: [[orthology-esiliculosus]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN-1124]]
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* [[TRYPDEG-PWY]], L-tryptophan degradation II (via pyruvate): [http://metacyc.org/META/NEW-IMAGE?object=TRYPDEG-PWY TRYPDEG-PWY]
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** Source: [[orthology-esiliculosus]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN-17678]]
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* [[PWY-3661]], glycine betaine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661]
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** Source: [[annotation-in-silico_annotation]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** Assignment: automated-name-match
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* [[SERDEG-PWY]], L-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=SERDEG-PWY SERDEG-PWY]
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* Reaction: [[RXN-600]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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*** Assignment: automated-name-match
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** '''7''' reactions found over '''24''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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* [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY]
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* Reaction: [[RXN-7784]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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* Reaction: [[RXN-9723]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-9724]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-9725]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-6027]]
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* [[PWY-361]]
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* [[PWY-5152]]
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* [[PWY1F-823]]
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* [[PWY-6035]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3786}}
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{{#set: in pathway=PWY0-1535|TRYPDEG-PWY|PWY-3661|SERDEG-PWY|PWY-5497|LCYSDEG-PWY}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: reconstruction category=annotation}}
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{{#set: left end position=1799}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: centisome position=19.3816    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction associated=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN|RXN-1101|RXN-1106|RXN-1124|RXN-17678|RXN-600|RXN-7784|RXN-9723|RXN-9724|RXN-9725}}
 +
{{#set: pathway associated=PWY-6027|PWY-361|PWY-5152|PWY1F-823|PWY-6035}}

Latest revision as of 21:07, 21 March 2018

Gene Tiso_gene_9504

  • right end position:
    • 3786
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1799
  • centisome position:
    • 19.3816
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9504&oldid=46116"