Difference between revisions of "PHEAMINOTRANS-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_14718 == * right end position: ** 5432 * transcription direction: ** POSITIVE * left end position: ** 3495 * centisome position: ** 63.9173...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_14718 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] ==
−
* right end position:
+
* direction:
−
** 5432
+
** REVERSIBLE
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
−
* left end position:
+
−
** 3495
+
−
* centisome position:
+
−
** 63.91734   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[2PGADEHYDRAT-RXN]]
+
* With identifiers:
−
** Source: [[annotation-in-silico_annotation]]
+
** 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[PHE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
−
*** Assignment: ec-number
+
* With common name(s):
−
** Source: [[annotation-experimental_annotation]]
+
** 1 L-glutamate[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''<=>''' 1 L-phenylalanine[c] '''+''' 1 2-oxoglutarate[c]
−
*** Assignment: ec-number
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_13892]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10680]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
Line 24: Line 25:
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
−
* Reaction: [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
+
* Gene: [[Tiso_gene_15680]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_17809]]
−
* [[GLYCOLYSIS]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY-6901]]
+
* Gene: [[Tiso_gene_17718]]
−
* [[P124-PWY]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY-6886]]
+
** Source: [[orthology-esiliculosus]]
−
* [[P341-PWY]]
+
** Source: [[orthology-creinhardtii]]
−
* [[PWY-1622]]
+
* Gene: [[Tiso_gene_13538]]
−
* [[GLUCONEO-PWY]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY66-399]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-1042]]
+
* Gene: [[Tiso_gene_6815]]
−
* [[NPGLUCAT-PWY]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY-5723]]
+
** Source: [[orthology-synechocystis]]
−
* [[ANAGLYCOLYSIS-PWY]]
+
** Source: [[orthology-creinhardtii]]
−
* [[PWY-5484]]
+
** Source: [[orthology-creinhardtii]]
−
* [[PWY-7124]]
+
== Pathways  ==
−
* [[PWY-6142]]
+
* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
−
* [[PWY-7003]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-2221]]
+
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
−
* [[PWY-6416]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6163]]
+
* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
−
* [[PWY-7218]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[QUINATEDEG-PWY]]
+
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
−
* [[P122-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6707]]
+
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=5432}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25152 25152]
−
{{#set: left end position=3495}}
+
* LIGAND-RXN:
−
{{#set: centisome position=63.91734    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
−
{{#set: reaction associated=2PGADEHYDRAT-RXN|3-DEHYDROQUINATE-DEHYDRATASE-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|P341-PWY|PWY-1622|GLUCONEO-PWY|PWY66-399|PWY-1042|NPGLUCAT-PWY|PWY-5723|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-7124|PWY-6142|PWY-7003|PWY-2221|PWY-6416|PWY-6163|PWY-7218|QUINATEDEG-PWY|P122-PWY|PWY-6707}}
+
** [http://www.uniprot.org/uniprot/O84642 O84642]
 +
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
 +
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
 +
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
 +
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
 +
** [http://www.uniprot.org/uniprot/O59096 O59096]
 +
** [http://www.uniprot.org/uniprot/O58489 O58489]
 +
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
 +
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
 +
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
 +
** [http://www.uniprot.org/uniprot/P95468 P95468]
 +
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
 +
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
 +
** [http://www.uniprot.org/uniprot/P74861 P74861]
 +
** [http://www.uniprot.org/uniprot/P04693 P04693]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-2.6.1.57}}
 +
{{#set: gene associated=Tiso_gene_13892|Tiso_gene_10680|Tiso_gene_15680|Tiso_gene_17809|Tiso_gene_17718|Tiso_gene_13538|Tiso_gene_6815}}
 +
{{#set: in pathway=ANAPHENOXI-PWY|PWY-7432|PWY-5079|PHESYN}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:07, 21 March 2018

Reaction PHEAMINOTRANS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 2-oxo-3-phenylpropanoate[c] <=> 1 L-phenylalanine[c] + 1 2-oxoglutarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ANAPHENOXI-PWY, L-phenylalanine degradation II (anaerobic): ANAPHENOXI-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7432, L-phenylalanine biosynthesis III (cytosolic, plants): PWY-7432
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5079, L-phenylalanine degradation III: PWY-5079
    • 2 reactions found over 4 reactions in the full pathway
  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PHEAMINOTRANS-RXN&oldid=46149"