Difference between revisions of "3-DEHYDROQUINATE-DEHYDRATASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_18652 == * right end position: ** 2678 * transcription direction: ** POSITIVE * left end position: ** 51 * centisome position: ** 1.7665397...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] == * direction: ** REVERSIBLE *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18652 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] ==
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* right end position:
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* direction:
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** 2678
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** pentafunctional_protein
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* left end position:
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* ec number:
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** 51
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** [http://enzyme.expasy.org/EC/4.2.1.10 EC-4.2.1.10]
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* centisome position:
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** 1.7665397   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[GLYOHMETRANS-RXN]]
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* With identifiers:
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** 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
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* With common name(s):
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** 1 3-dehydroquinate[c] '''<=>''' 1 3-dehydroshikimate[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14718]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5752]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5753]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5619]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8720]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-6707]], gallate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6416]], quinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6416 PWY-6416]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[QUINATEDEG-PWY]], quinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-5234]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-2161]]
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* [[PWY-1622]]
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* [[PWY-3841]]
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* [[1CMET2-PWY]]
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* [[PWY-3661]]
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* [[GLYSYN-PWY]]
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* [[PWY-5497]]
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* [[PWY-2201]]
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* [[PWY-181]]
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−
* [[PWY-3661-1]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=2678}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
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{{#set: left end position=51}}
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* LIGAND-RXN:
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{{#set: centisome position=1.7665397    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
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{{#set: reaction associated=GLYOHMETRANS-RXN|RXN0-5234}}
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* UNIPROT:
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
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** [http://www.uniprot.org/uniprot/P05195 P05195]
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** [http://www.uniprot.org/uniprot/P46380 P46380]
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** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P43878 P43878]
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** [http://www.uniprot.org/uniprot/P05194 P05194]
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** [http://www.uniprot.org/uniprot/Q58849 Q58849]
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** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
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** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
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** [http://www.uniprot.org/uniprot/P05147 P05147]
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** [http://www.uniprot.org/uniprot/P24670 P24670]
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** [http://www.uniprot.org/uniprot/P35146 P35146]
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** [http://www.uniprot.org/uniprot/Q42947 Q42947]
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** [http://www.uniprot.org/uniprot/Q48255 Q48255]
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** [http://www.uniprot.org/uniprot/P73367 P73367]
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** [http://www.uniprot.org/uniprot/O65917 O65917]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-4.2.1.10}}
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{{#set: gene associated=Tiso_gene_14718|Tiso_gene_5752|Tiso_gene_5753|Tiso_gene_5619|Tiso_gene_8720}}
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{{#set: in pathway=PWY-6707|PWY-6416|QUINATEDEG-PWY|PWY-6163}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:10, 21 March 2018

Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6707, gallate biosynthesis: PWY-6707
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6416, quinate degradation II: PWY-6416
    • 2 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY, quinate degradation I: QUINATEDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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