Difference between revisions of "URPHOS-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=1-Alkyl-glycerol-3-phosphate 1-Alkyl-glycerol-3-phosphate] == * common name: ** a 1-alkyl-sn-gl...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] == * direction: ** REVERSIBLE * common name: ** uridine_phosphorylase * ec n...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=1-Alkyl-glycerol-3-phosphate 1-Alkyl-glycerol-3-phosphate] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URPHOS-RXN URPHOS-RXN] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** a 1-alkyl-sn-glycerol 3-phosphate
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** uridine_phosphorylase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
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** [http://enzyme.expasy.org/EC/2.4.2.3 EC-2.4.2.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17729]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[URACIL]][c] '''+''' 1 [[RIBOSE-1P]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 phosphate[c] '''+''' 1 uridine[c] '''<=>''' 1 uracil[c] '''+''' 1 &alpha;-D-ribose-1-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_20384]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a 1-alkyl-sn-glycerol 3-phosphate}}
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* RHEA:
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{{#set: consumed by=RXN-17729}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24388 24388]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P52624 P52624]
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** [http://www.uniprot.org/uniprot/P43770 P43770]
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** [http://www.uniprot.org/uniprot/Q16831 Q16831]
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** [http://www.uniprot.org/uniprot/P12758 P12758]
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** [http://www.uniprot.org/uniprot/P19662 P19662]
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** [http://www.uniprot.org/uniprot/O08444 O08444]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=uridine_phosphorylase}}
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{{#set: ec number=EC-2.4.2.2}}
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{{#set: ec number=EC-2.4.2.3}}
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{{#set: gene associated=Tiso_gene_20384}}
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{{#set: in pathway=PWY-5532|PWY0-1295}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:12, 21 March 2018

Reaction URPHOS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • uridine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phosphate[c] + 1 uridine[c] <=> 1 uracil[c] + 1 α-D-ribose-1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5532, nucleoside and nucleotide degradation (archaea): PWY-5532
    • 3 reactions found over 10 reactions in the full pathway
  • PWY0-1295, pyrimidine ribonucleosides degradation: PWY0-1295
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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