Difference between revisions of "Tiso gene 9923"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10952 RXN-10952] == * direction: ** LEFT-TO-RIGHT * common name: ** myo-inositol-1(or_4)-monoph...")
(Created page with "Category:Gene == Gene Tiso_gene_9923 == * right end position: ** 5333 * transcription direction: ** POSITIVE * left end position: ** 5185 * centisome position: ** 57.78446...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10952 RXN-10952] ==
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== Gene Tiso_gene_9923 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5333
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* common name:
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* transcription direction:
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** myo-inositol-1(or_4)-monophosphatase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.3.25 EC-3.1.3.25]
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** 5185
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* centisome position:
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** 57.784462   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3PGAREARR-RXN]]
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** 1 [[D-MYO-INOSITOL-4-PHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[MYO-INOSITOL]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 1D-myo-inositol 4-monophosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 myo-inositol[c]
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* Reaction: [[RXN-15509]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15510]]
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* Gene: [[Tiso_gene_11614]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15511]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_2527]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15512]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_14713]]
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* Reaction: [[RXN-15513]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-6363]], D-myo-inositol (1,4,5)-trisphosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6363 PWY-6363]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY-2221]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-7218]]
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* [[PWY-6405]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[PWY66-399]]
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* [[PWY-5723]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[P122-PWY]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5333}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30738 30738]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5185}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01186 R01186]
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{{#set: centisome position=57.784462    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
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{{#set: common name=myo-inositol-1(or_4)-monophosphatase}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}
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{{#set: ec number=EC-3.1.3.25}}
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{{#set: gene associated=Tiso_gene_11614|Tiso_gene_2527|Tiso_gene_14713}}
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{{#set: in pathway=PWY-6363}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:12, 21 March 2018

Gene Tiso_gene_9923

  • right end position:
    • 5333
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5185
  • centisome position:
    • 57.784462
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9923&oldid=46756"