Difference between revisions of "RXN-600"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-N-ACETYLTRANSFERASE-RXN GLUTAMATE-N-ACETYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase * e...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-N-ACETYLTRANSFERASE-RXN GLUTAMATE-N-ACETYLTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** n-acetylglutamate_synthase
+
** dihydroflavonol-4-reductase
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.35 EC-2.3.1.35]
+
** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLT]][c] '''+''' 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''=>''' 1 [[ACETYL-GLU]][c] '''+''' 1 [[L-ORNITHINE]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-474]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-590]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamate[c] '''+''' 1 N-acetyl-L-ornithine[c] '''=>''' 1 N-acetyl-L-glutamate[c] '''+''' 1 L-ornithine[c]
+
** 2 H+[c] '''+''' 1 NADPH[c] '''+''' 1 (+)-taxifolin[c] '''=>''' 1 NADP+[c] '''+''' 1 (2R,3S,4S)-leucocyanidin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_5365]]
+
* Gene: [[Tiso_gene_15272]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11016]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_9503]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_11663]]
+
* Gene: [[Tiso_gene_9504]]
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_18369]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
Line 43: Line 41:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15349 15349]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02282 R02282]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03636 R03636]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P38434 P38434]
+
−
** [http://www.uniprot.org/uniprot/Q57645 Q57645]
+
−
** [http://www.uniprot.org/uniprot/Q07908 Q07908]
+
−
** [http://www.uniprot.org/uniprot/Q04728 Q04728]
+
−
** [http://www.uniprot.org/uniprot/P74122 P74122]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=n-acetylglutamate_synthase}}
+
{{#set: common name=dihydroflavonol-4-reductase}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.1.1.219}}
−
{{#set: ec number=EC-2.3.1.35}}
+
{{#set: gene associated=Tiso_gene_15272|Tiso_gene_11016|Tiso_gene_9503|Tiso_gene_9504}}
−
{{#set: gene associated=Tiso_gene_5365|Tiso_gene_11663|Tiso_gene_18369}}
+
{{#set: in pathway=PWY1F-823}}
−
{{#set: in pathway=ARGSYNBSUB-PWY}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:12, 21 March 2018

Reaction RXN-600

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydroflavonol-4-reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] + 1 NADPH[c] + 1 (+)-taxifolin[c] => 1 NADP+[c] + 1 (2R,3S,4S)-leucocyanidin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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