Difference between revisions of "3.1.26.3-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSINE-NUCLEOSIDASE-RXN ADENOSINE-NUCLEOSIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** low_quality_protein:_...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSINE-NUCLEOSIDASE-RXN ADENOSINE-NUCLEOSIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** inosine-uridine_preferring_nucleoside_hydrolase
+
** low_quality_protein:_ribonuclease_3-like
 +
** mini-ribonuclease_3
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.2.7 EC-3.2.2.7]
+
** [http://enzyme.expasy.org/EC/3.1.26.3 EC-3.1.26.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADENOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[D-Ribofuranose]][c]
+
** 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c] '''+''' 2 [[mRNA-Fragments]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 adenosine[c] '''+''' 1 H2O[c] '''=>''' 1 adenine[c] '''+''' 1 D-ribofuranose[c]
+
** 1 RNase III mRNA processing substrate[c] '''+''' 2 H2O[c] '''=>''' 1 RNase III processing product mRNA[c] '''+''' 2 an mRNA fragment[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_9396]]
+
* Gene: [[Tiso_gene_10131]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6282]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10752]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10753]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10649]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_608]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6605]], adenine and adenosine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6605 PWY-6605]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 28: Line 43:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18669 18669]
+
** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P51833 P51833]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01245 R01245]
+
** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
 +
** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
 +
** [http://www.uniprot.org/uniprot/P44441 P44441]
 +
** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
 +
** [http://www.uniprot.org/uniprot/P09155 P09155]
 +
** [http://www.uniprot.org/uniprot/Q52698 Q52698]
 +
** [http://www.uniprot.org/uniprot/Q49034 Q49034]
 +
** [http://www.uniprot.org/uniprot/O69469 O69469]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=inosine-uridine_preferring_nucleoside_hydrolase}}
+
{{#set: common name=low_quality_protein:_ribonuclease_3-like}}
−
{{#set: ec number=EC-3.2.2.7}}
+
{{#set: common name=mini-ribonuclease_3}}
−
{{#set: gene associated=Tiso_gene_9396}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWY-6605}}
+
{{#set: ec number=EC-3.1.26.3}}
 +
{{#set: gene associated=Tiso_gene_10131|Tiso_gene_6282|Tiso_gene_10752|Tiso_gene_10753|Tiso_gene_10649|Tiso_gene_608}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:12, 21 March 2018

Reaction 3.1.26.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • low_quality_protein:_ribonuclease_3-like
    • mini-ribonuclease_3
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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