Difference between revisions of "RXN0-5222"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15816 RXN-15816] == * direction: ** LEFT-TO-RIGHT * common name: ** cytochrome_b6-fcomplexiron-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5222 RXN0-5222] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanase * Synonym(s): ** cy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15816 RXN-15816] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5222 RXN0-5222] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** cytochrome_b6-fcomplexiron-sulfurchloroplastic
+
** cyanase
−
** ubiquinol-cytochrome_c_reductase
+
−
** probable_mitochondrial-processingpeptidasesubunitbeta
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** cyanate lyase
 +
** cyanate hydrolase
 +
** cyanate aminohydrolase
 +
** cyanate C-N-lyase
 +
** cyanate hydratase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[ETR-Quinols]][c] '''=>''' 2 [[PROTON]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[ETR-Quinones]][c]
+
** 1 [[CARBAMATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 an oxidized c-type cytochrome[e] '''+''' 1 an electron-transfer quinol[c] '''=>''' 2 H+[c] '''+''' 2 a reduced c-type cytochrome[e] '''+''' 1 an electron-transfer quinone[c]
+
** 1 carbamate[c] '''+''' 2 H+[c] '''=>''' 1 CO2[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_15926]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Tiso_gene_7235]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
* Gene: [[Tiso_gene_4973]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
* Gene: [[Tiso_gene_18330]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_9627]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1471]], uracil degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1471 PWY0-1471]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15649 15649]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07316 R07316]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
+
{{#set: common name=cyanase}}
−
{{#set: common name=ubiquinol-cytochrome_c_reductase}}
+
{{#set: common name=cyanate lyase|cyanate hydrolase|cyanate aminohydrolase|cyanate C-N-lyase|cyanate hydratase}}
−
{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
+
{{#set: in pathway=CYANCAT-PWY|PWY0-1471}}
−
{{#set: ec number=EC-1.10.2.2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: gene associated=Tiso_gene_15926|Tiso_gene_7235|Tiso_gene_4973|Tiso_gene_18330|Tiso_gene_9627}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 21:14, 21 March 2018

Reaction RXN0-5222

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cyanase
  • Synonym(s):
    • cyanate lyase
    • cyanate hydrolase
    • cyanate aminohydrolase
    • cyanate C-N-lyase
    • cyanate hydratase

Reaction Formula

Genes associated with this reaction

Pathways

  • CYANCAT-PWY, cyanate degradation: CYANCAT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1471, uracil degradation III: PWY0-1471
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-5222&oldid=47091"