Difference between revisions of "Tiso gene 6640"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
(Created page with "Category:Gene == Gene Tiso_gene_6640 == * Synonym(s): == Reactions associated == * Reaction: 5-NUCLEOTID-RXN ** Source: orthology-esiliculosus * Reaction: AMP-D...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] ==
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== Gene Tiso_gene_6640 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** polyketide_synthase
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** 3-oxoacyl-synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5-NUCLEOTID-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[3-oxo-palmitoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[AMP-DEPHOSPHORYLATION-RXN]]
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** 1 H+[c] '''+''' 1 a myristoyl-[acp][c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 a 3-oxo-palmitoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14025]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14026]]
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* Gene: [[Tiso_gene_15991]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14227]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-5841]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_136]]
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* Reaction: [[RXN-7607]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19302]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_500]]
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* Reaction: [[RXN-7609]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14485]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_135]]
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* Reaction: [[XMPXAN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5939]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[PWY-5381]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-6607]]
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*** Tool: [[pathwaytools]]
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* [[PWY-7185]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7821]]
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*** Tool: [[pathwaytools]]
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* [[SALVADEHYPOX-PWY]]
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* [[PWY-6596]]
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* [[NAD-BIOSYNTHESIS-II]]
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* [[PWY-6606]]
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* [[PWY-6608]]
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* [[PWY-5695]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=5-NUCLEOTID-RXN|AMP-DEPHOSPHORYLATION-RXN|RXN-14025|RXN-14026|RXN-14227|RXN-5841|RXN-7607|RXN-7609|XMPXAN-RXN}}
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{{#set: common name=polyketide_synthase}}
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{{#set: pathway associated=PWY-5381|PWY-6607|PWY-7185|PWY-7821|SALVADEHYPOX-PWY|PWY-6596|NAD-BIOSYNTHESIS-II|PWY-6606|PWY-6608|PWY-5695}}
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Tiso_gene_15991|Tiso_gene_136|Tiso_gene_19302|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_14485|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_5939}}
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{{#set: in pathway=PWY-5994}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:14, 21 March 2018

Gene Tiso_gene_6640

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6640&oldid=47124"