Difference between revisions of "Tiso gene 16634"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRROLINEDEH-RXN HYDROXYPYRROLINEDEH-RXN] == * direction: ** REVERSIBLE * common name: ** py...")
(Created page with "Category:Gene == Gene Tiso_gene_16634 == * right end position: ** 3998 * transcription direction: ** POSITIVE * left end position: ** 3 * centisome position: ** 7.09219900...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRROLINEDEH-RXN HYDROXYPYRROLINEDEH-RXN] ==
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== Gene Tiso_gene_16634 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 3998
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* common name:
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* transcription direction:
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** pyrroline-hydroxy-carboxylate dehydrogenase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.5.1 EC-1.5.1]
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** 3
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* centisome position:
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** 7.09219900e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[G5DH]]
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** 1 [[PYRROLINE-HYDROXY-CARBOXYLATE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[L-ERYTHRO-4-HYDROXY-GLUTAMATE]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[G5DHm]]
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** 1 (3R,5S)-1-pyrroline-3-hydroxy-5-carboxylate[c] '''+''' 1 NAD+[c] '''+''' 2 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 erythro-4-hydroxy-L-glutamate[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[GLUTKIN-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6952]]
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* Reaction: [[GLUTSEMIALDEHYDROG-RXN]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_9680]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_886]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_3513]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
 
** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[PROLINE-MULTI]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[PYRROLINECARBDEHYDROG-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[ARGASEDEG-PWY]]
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* [[PWY-6922]]
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* [[PWY-6853]]
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* [[PROSYN-PWY]]
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* [[PWY-3341]]
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* [[PROUT-PWY]]
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* [[ARGININE-SYN4-PWY]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=3998}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04444 R04444]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=3}}
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{{#set: common name=pyrroline-hydroxy-carboxylate dehydrogenase}}
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{{#set: centisome position=7.09219900e-2}}
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{{#set: ec number=EC-1.5.1}}
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{{#set: reaction associated=G5DH|G5DHm|GLUTKIN-RXN|GLUTSEMIALDEHYDROG-RXN|PROLINE-MULTI|PYRROLINECARBDEHYDROG-RXN|RXN-14116}}
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{{#set: gene associated=Tiso_gene_6952|Tiso_gene_9680|Tiso_gene_886|Tiso_gene_3513}}
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{{#set: pathway associated=ARGASEDEG-PWY|PWY-6922|PWY-6853|PROSYN-PWY|PWY-3341|PROUT-PWY|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:16, 21 March 2018

Gene Tiso_gene_16634

  • right end position:
    • 3998
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3
  • centisome position:
    • 7.09219900e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16634&oldid=47336"