Difference between revisions of "6.3.2.25-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-339 RXN1G-339] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis-cis-delta7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tubulin-tyrosine_liga...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-339 RXN1G-339] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.25-RXN 6.3.2.25-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** trans-delta2-cis-cis-delta7-19-C38:3-[acyl-carrier protein] reductase
+
** tubulin-tyrosine_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
+
** [http://enzyme.expasy.org/EC/6.3.2.25 EC-6.3.2.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[trans-D2-cis-cis-D7-19-C38-3-ACPs]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[cis-cis-D7-19-C38-2-ACPs]][c]
+
** 1 [[Detyrosinated-alpha--tubulins]][c] '''+''' 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Alpha-tubulins]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a trans-delta2-cis-cis-delta7-19-C38:3-[acp][c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 a cis,cis-delta7,19-C38:2-[acp][c]
+
** 1 detyrosinated α-tubulin[c] '''+''' 1 L-tyrosine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 α-tubulin[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_10778]]
+
* Gene: [[Tiso_gene_9268]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17589]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17234]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15094]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_5828]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_20330]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15093]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_10440]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14575]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10591]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3379]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4516]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17450]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 
−
** '''86''' reactions found over '''182''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04730 R04730]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P38160 P38160]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=trans-delta2-cis-cis-delta7-19-C38:3-[acyl-carrier protein] reductase}}
+
{{#set: common name=tubulin-tyrosine_ligase}}
−
{{#set: ec number=EC-1.3.1.M4}}
+
{{#set: ec number=EC-6.3.2.25}}
−
{{#set: gene associated=Tiso_gene_10778}}
+
{{#set: gene associated=Tiso_gene_9268|Tiso_gene_17589|Tiso_gene_17234|Tiso_gene_15094|Tiso_gene_5828|Tiso_gene_20330|Tiso_gene_15093|Tiso_gene_10440|Tiso_gene_14575|Tiso_gene_10591|Tiso_gene_3379|Tiso_gene_4516|Tiso_gene_17450}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:18, 21 March 2018

Reaction 6.3.2.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tubulin-tyrosine_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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