Difference between revisions of "RXN-13039"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13757 CPD-13757] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CC(O)C1(C(O)CCC2(C)(C(=O)C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13039 RXN-13039] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a **...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13757 CPD-13757] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13039 RXN-13039] ==
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* smiles:
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* direction:
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CC(O)C1(C(O)CCC2(C)(C(=O)CC[CH]12)))COP(=O)(OP(=O)(OCC3(C(OP([O-])(=O)[O-])C(O)C(O3)N5(C4(=C(C(N)=NC=N4)N=C5))))[O-])[O-]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
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** lipoate-protein_ligase_a
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* inchi key:
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** lipoate-protein_ligase
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** InChIKey=GXYIOJONRQGUCV-SWBALSFASA-J
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* molecular weight:
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** 1001.785   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-12750]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[LIPOYL-AMP]][c] '''+''' 1 [[Gcv-H]][c] '''=>''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 lipoyl-adenylate[c] '''+''' 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''+''' 2 H+[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17215]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_8713]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4494]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17216]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4493]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657574 90657574]
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CC(O)C1(C(O)CCC2(C)(C(=O)CC[CH]12)))COP(=O)(OP(=O)(OCC3(C(OP([O-])(=O)[O-])C(O)C(O3)N5(C4(=C(C(N)=NC=N4)N=C5))))[O-])[O-]}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: common name=3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA}}
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{{#set: gene associated=Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_4494|Tiso_gene_17216|Tiso_gene_4493}}
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{{#set: inchi key=InChIKey=GXYIOJONRQGUCV-SWBALSFASA-J}}
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{{#set: in pathway=PWY-6984}}
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{{#set: molecular weight=1001.785    }}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=RXN-12750}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:18, 21 March 2018

Reaction RXN-13039

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 lipoyl-adenylate[c] + 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] => 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] + 2 H+[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13039&oldid=47645"