Difference between revisions of "Tiso gene 6475"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-2-MONOOXYGENASE-RXN ARGININE-2-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec nu...")
(Created page with "Category:Gene == Gene Tiso_gene_6475 == * right end position: ** 2698 * transcription direction: ** NEGATIVE * left end position: ** 550 * centisome position: ** 4.5111547...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-2-MONOOXYGENASE-RXN ARGININE-2-MONOOXYGENASE-RXN] ==
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== Gene Tiso_gene_6475 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2698
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.13.12.1 EC-1.13.12.1]
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** NEGATIVE
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* left end position:
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** 550
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* centisome position:
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** 4.5111547   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACYLCOADEHYDROG-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[ARG]][c] '''=>''' 1 [[4-GUANIDO-BUTYRAMIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 oxygen[c] '''+''' 1 L-arginine[c] '''=>''' 1 4-guanidinobutyramide[c] '''+''' 1 H2O[c] '''+''' 1 CO2[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY]
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* Reaction: [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* Reaction: [[RXN-11734]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13615]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14131]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14193]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14229]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14264]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-14278]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-16540]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16557]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17775]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17779]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17783]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17784]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17788]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17792]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17796]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2698}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10548 10548]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=550}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00559 R00559]
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{{#set: centisome position=4.5111547    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: ec number=EC-1.13.12.1}}
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{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
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{{#set: in pathway=ARGDEG-V-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 21:19, 21 March 2018

Gene Tiso_gene_6475

  • right end position:
    • 2698
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 550
  • centisome position:
    • 4.5111547
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6475&oldid=47723"