Difference between revisions of "HOMOGENTISATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-glutaryl-[acp] methyl...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE HOMOGENTISATE] == * smiles: ** C1(C(=CC(=C(C=1)O)CC([O-])=O)O) * common name: **...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE HOMOGENTISATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C1(C(=CC(=C(C=1)O)CC([O-])=O)O)
 
* common name:
 
* common name:
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** 3-oxo-glutaryl-[acp] methyl ester synthase
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** homogentisate
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** 3-oxoacyl-synthase
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* inchi key:
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* ec number:
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** InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* molecular weight:
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** 167.141   
 
* Synonym(s):
 
* Synonym(s):
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** 2,5-dihydroxyphenylacetate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[HGDO]]
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Malonyl-acp-methyl-ester]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c]
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* [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
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* With common name(s):
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* [[RXN-2541]]
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** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp] methyl ester[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-glutaryl-[acp] methyl ester[c]
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== Reaction(s) known to produce the compound ==
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* [[HPPD]]
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== Genes associated with this reaction  ==
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* Gene: [[Tiso_gene_15991]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19302]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14485]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5939]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=3-oxo-glutaryl-[acp] methyl ester synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460389 5460389]
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{{#set: common name=3-oxoacyl-synthase}}
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* HMDB : HMDB00130
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{{#set: ec number=EC-2.3.1.41}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_5939}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00544 C00544]
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{{#set: in pathway=PWY-6519}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.chemspider.com/Chemical-Structure.4573931.html 4573931]
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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* CHEBI:
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16169 16169]
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* METABOLIGHTS : MTBLC16169
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{{#set: smiles=C1(C(=CC(=C(C=1)O)CC([O-])=O)O)}}
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{{#set: common name=homogentisate}}
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{{#set: inchi key=InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M}}
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{{#set: molecular weight=167.141    }}
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{{#set: common name=2,5-dihydroxyphenylacetate}}
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{{#set: consumed by=HGDO|HOMOGENTISATE-12-DIOXYGENASE-RXN|RXN-2541}}
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{{#set: produced by=HPPD|4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN}}

Latest revision as of 21:20, 21 March 2018

Metabolite HOMOGENTISATE

  • smiles:
    • C1(C(=CC(=C(C=1)O)CC([O-])=O)O)
  • common name:
    • homogentisate
  • inchi key:
    • InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M
  • molecular weight:
    • 167.141
  • Synonym(s):
    • 2,5-dihydroxyphenylacetate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(C(=CC(=C(C=1)O)CC([O-])=O)O)" cannot be used as a page name in this wiki.




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