Difference between revisions of "Tiso gene 9435"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14789 RXN-14789] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
(Created page with "Category:Gene == Gene Tiso_gene_9435 == * right end position: ** 8586 * transcription direction: ** POSITIVE * left end position: ** 5578 * centisome position: ** 59.63224...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14789 RXN-14789] ==
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== Gene Tiso_gene_9435 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 8586
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* common name:
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* transcription direction:
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** acyl-coenzyme_a_oxidase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
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** 5578
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* centisome position:
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** 59.63224   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[F16BDEPHOS-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15677]][c] '''=>''' 1 [[CPD-15661]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* With common name(s):
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** 1 oxygen[c] '''+''' 1 4-trans-undecenoyl-CoA[c] '''=>''' 1 2-trans, 4-trans-undecadienoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18566]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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* [[PWY-7338]], 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7338 PWY-7338]
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* Reaction: [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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** Source: [[orthology-athaliana]]
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== Reconstruction information  ==
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** Source: [[orthology-athaliana]]
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[GLUCONEO-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[SUCSYN-PWY]]
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*** Tool: [[pathwaytools]]
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* [[GLYCOLYSIS]]
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* [[CALVIN-PWY]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8586}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: left end position=5578}}
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{{#set: gene associated=Tiso_gene_18566}}
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{{#set: centisome position=59.63224    }}
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{{#set: in pathway=PWY-7338}}
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{{#set: reaction associated=F16BDEPHOS-RXN|SEDOHEPTULOSE-BISPHOSPHATASE-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=GLUCONEO-PWY|SUCSYN-PWY|GLYCOLYSIS|CALVIN-PWY|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_9435

  • right end position:
    • 8586
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5578
  • centisome position:
    • 59.63224
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9435&oldid=48056"