Difference between revisions of "CHORISMATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPSYN-RXN ATPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** v-type_proton_atpase ** ORF...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE CHORISMATE] == * smiles: ** C=C(C(=O)[O-])OC1(C(O)C=CC(C([O-])=O)=C1) * common name:...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPSYN-RXN ATPSYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE CHORISMATE] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C=C(C(=O)[O-])OC1(C(O)C=CC(C([O-])=O)=C1)
 
* common name:
 
* common name:
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** v-type_proton_atpase
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** chorismate
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** ORF
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* inchi key:
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** vacuolar_h+-_sector_c
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** InChIKey=WTFXTQVDAKGDEY-HTQZYQBOSA-L
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** v-type_proton_atpase_catalytic_subunit_a
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* molecular weight:
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** vacuolar_h+-atpase_v0_subunits_a
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** 224.17   
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** atp_synthase_gamma_chloroplastic
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** atp_synthase_gamma_subunit
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** atp_synthase_subunit_mitochondrial
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** ycf35
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** atp_synthase_delta_mitochondrial
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** v-type_proton_atpase_subunit_h
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** v-type_protonatpasesubunitd1
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.3.14 EC-3.6.3.14]
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* Synonym(s):
 
* Synonym(s):
 +
** chorismic acid
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ADP]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Pi]][c] '''<=>''' 3 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c]
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* [[CHORISMATE-SYNTHASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ADP[c] '''+''' 4 H+[e] '''+''' 1 phosphate[c] '''<=>''' 3 H+[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c]
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* [[PABASYN-RXN]]
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* [[CHORISMATEMUT-RXN]]
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== Genes associated with this reaction  ==
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* [[ISOCHORSYN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ANTHRANSYN-RXN]]
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* Gene: [[Tiso_gene_7213]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2798]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1366]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10981]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_15850]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7215]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18105]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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−
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6012]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12618]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_11754]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9460]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11192]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11155]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5307]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6592]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17383]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1365]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11753]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 55508-12-8
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20852 20852]
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* PUBCHEM:
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{{#set: direction=REVERSIBLE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460312 5460312]
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{{#set: common name=v-type_proton_atpase}}
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* HMDB : HMDB12199
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{{#set: common name=ORF}}
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* LIGAND-CPD:
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{{#set: common name=vacuolar_h+-_sector_c}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00251 C00251]
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{{#set: common name=v-type_proton_atpase_catalytic_subunit_a}}
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* CHEMSPIDER:
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{{#set: common name=vacuolar_h+-atpase_v0_subunits_a}}
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** [http://www.chemspider.com/Chemical-Structure.4573889.html 4573889]
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{{#set: common name=atp_synthase_gamma_chloroplastic}}
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* CHEBI:
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{{#set: common name=atp_synthase_gamma_subunit}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29748 29748]
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{{#set: common name=atp_synthase_subunit_mitochondrial}}
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* BIGG : chor
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{{#set: common name=ycf35}}
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{{#set: smiles=C=C(C(=O)[O-])OC1(C(O)C=CC(C([O-])=O)=C1)}}
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{{#set: common name=atp_synthase_delta_mitochondrial}}
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{{#set: common name=chorismate}}
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{{#set: common name=v-type_proton_atpase_subunit_h}}
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{{#set: inchi key=InChIKey=WTFXTQVDAKGDEY-HTQZYQBOSA-L}}
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{{#set: common name=v-type_protonatpasesubunitd1}}
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{{#set: molecular weight=224.17    }}
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{{#set: ec number=EC-3.6.3.14}}
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{{#set: common name=chorismic acid}}
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{{#set: gene associated=Tiso_gene_7213|Tiso_gene_2798|Tiso_gene_1366|Tiso_gene_10981|Tiso_gene_15850|Tiso_gene_7215|Tiso_gene_18105|Tiso_gene_6012|Tiso_gene_12618|Tiso_gene_11754|Tiso_gene_9460|Tiso_gene_11192|Tiso_gene_11155|Tiso_gene_5307|Tiso_gene_6592|Tiso_gene_17383|Tiso_gene_1365|Tiso_gene_11753}}
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{{#set: produced by=CHORISMATE-SYNTHASE-RXN}}
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{{#set: in pathway=PWY-7219}}
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{{#set: reversible reaction associated=PABASYN-RXN|CHORISMATEMUT-RXN|ISOCHORSYN-RXN|ANTHRANSYN-RXN}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
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−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:21, 21 March 2018

Metabolite CHORISMATE

  • smiles:
    • C=C(C(=O)[O-])OC1(C(O)C=CC(C([O-])=O)=C1)
  • common name:
    • chorismate
  • inchi key:
    • InChIKey=WTFXTQVDAKGDEY-HTQZYQBOSA-L
  • molecular weight:
    • 224.17
  • Synonym(s):
    • chorismic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=C(C(=O)[O-])OC1(C(O)C=CC(C([O-])=O)=C1)" cannot be used as a page name in this wiki.




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