Difference between revisions of "Tiso gene 9531"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.16-RXN 3.1.3.16-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formin_domain_contain...")
(Created page with "Category:Gene == Gene Tiso_gene_9531 == * right end position: ** 5385 * transcription direction: ** NEGATIVE * left end position: ** 3645 * centisome position: ** 39.35435...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.16-RXN 3.1.3.16-RXN] ==
+
== Gene Tiso_gene_9531 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
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** 5385
−
* common name:
+
* transcription direction:
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** formin_domain_containing_protein
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** NEGATIVE
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** formin-like_protein_14
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* left end position:
−
** protein_phosphatase_1
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** 3645
−
** ORF
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* centisome position:
−
** serine_threonine-protein_phosphatase
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** 39.35435   
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** serine_threonine_protein_phosphatase_2a
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−
** serine_threonine-phosphatase
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−
** protein_phosphatase
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−
** dual_specificity_phosphatase
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−
** protein_phosphatase_2c
+
−
* ec number:
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−
** [http://enzyme.expasy.org/EC/3.1.3.16 EC-3.1.3.16]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[Protein-Ser-or-Thr-phosphate]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Protein-L-serine-or-L-threonine]][c]
+
−
* With common name(s):
+
−
** 1 H2O[c] '''+''' 1 a [protein] (L-serine/L-threonine) phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 a [protein]-(L-serine/L-threonine)[c]
+
−
 
+
−
== Genes associated with this reaction  ==
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−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_5305]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_3751]]
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−
** Source: [[orthology-esiliculosus]]
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−
* Gene: [[Tiso_gene_2034]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_11870]]
+
−
** Source: [[orthology-esiliculosus]]
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−
* Gene: [[Tiso_gene_1840]]
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_18502]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_16524]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_15788]]
+
−
** Source: [[orthology-esiliculosus]]
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−
* Gene: [[Tiso_gene_13371]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_4137]]
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−
** Source: [[orthology-esiliculosus]]
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−
* Gene: [[Tiso_gene_452]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_19603]]
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−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_12379]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_15176]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_4164]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_17314]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_20309]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_10912]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
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−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_7035]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_2578]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_16525]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_12989]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_2190]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_7036]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Tiso_gene_453]]
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−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_18472]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: AUTOMATED-NAME-MATCH
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−
* Gene: [[Tiso_gene_1395]]
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−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
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−
* Gene: [[Tiso_gene_15559]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
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−
== Reconstruction information  ==
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−
* Category: [[orthology]]
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−
** Source: [[orthology-esiliculosus]]
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−
*** Tool: [[pantograph]]
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−
* Category: [[annotation]]
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Tool: [[pathwaytools]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: right end position=5385}}
−
** [http://www.uniprot.org/uniprot/P67776 P67776]
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{{#set: transcription direction=NEGATIVE}}
−
** [http://www.uniprot.org/uniprot/P67774 P67774]
+
{{#set: left end position=3645}}
−
** [http://www.uniprot.org/uniprot/P63328 P63328]
+
{{#set: centisome position=39.35435    }}
−
** [http://www.uniprot.org/uniprot/P20650 P20650]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
−
** [http://www.uniprot.org/uniprot/P20654 P20654]
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−
** [http://www.uniprot.org/uniprot/P13681 P13681]
+
−
** [http://www.uniprot.org/uniprot/P63329 P63329]
+
−
** [http://www.uniprot.org/uniprot/P20651 P20651]
+
−
** [http://www.uniprot.org/uniprot/Q7M2R6 Q7M2R6]
+
−
** [http://www.uniprot.org/uniprot/P23635 P23635]
+
−
** [http://www.uniprot.org/uniprot/P16298 P16298]
+
−
** [http://www.uniprot.org/uniprot/Q04071 Q04071]
+
−
** [http://www.uniprot.org/uniprot/P48455 P48455]
+
−
** [http://www.uniprot.org/uniprot/Q7M2L6 Q7M2L6]
+
−
** [http://www.uniprot.org/uniprot/Q00756 Q00756]
+
−
** [http://www.uniprot.org/uniprot/Q05681 Q05681]
+
−
** [http://www.uniprot.org/uniprot/P36876 P36876]
+
−
** [http://www.uniprot.org/uniprot/P40421 P40421]
+
−
** [http://www.uniprot.org/uniprot/Q27787 Q27787]
+
−
** [http://www.uniprot.org/uniprot/P36872 P36872]
+
−
** [http://www.uniprot.org/uniprot/Q07161 Q07161]
+
−
** [http://www.uniprot.org/uniprot/Q06190 Q06190]
+
−
** [http://www.uniprot.org/uniprot/P36982 P36982]
+
−
** [http://www.uniprot.org/uniprot/P49444 P49444]
+
−
** [http://www.uniprot.org/uniprot/P50410 P50410]
+
−
** [http://www.uniprot.org/uniprot/P40371 P40371]
+
−
** [http://www.uniprot.org/uniprot/P48452 P48452]
+
−
** [http://www.uniprot.org/uniprot/P23880 P23880]
+
−
** [http://www.uniprot.org/uniprot/P23636 P23636]
+
−
** [http://www.uniprot.org/uniprot/P48456 P48456]
+
−
** [http://www.uniprot.org/uniprot/Q27786 Q27786]
+
−
** [http://www.uniprot.org/uniprot/P63087 P63087]
+
−
** [http://www.uniprot.org/uniprot/Q04104 Q04104]
+
−
** [http://www.uniprot.org/uniprot/P62141 P62141]
+
−
** [http://www.uniprot.org/uniprot/P54613 P54613]
+
−
** [http://www.uniprot.org/uniprot/Q04101 Q04101]
+
−
** [http://www.uniprot.org/uniprot/O28453 O28453]
+
−
** [http://www.uniprot.org/uniprot/Q04102 Q04102]
+
−
** [http://www.uniprot.org/uniprot/Q04103 Q04103]
+
−
** [http://www.uniprot.org/uniprot/Q16821 Q16821]
+
−
** [http://www.uniprot.org/uniprot/P36993 P36993]
+
−
** [http://www.uniprot.org/uniprot/Q16474 Q16474]
+
−
** [http://www.uniprot.org/uniprot/P62142 P62142]
+
−
** [http://www.uniprot.org/uniprot/P63088 P63088]
+
−
** [http://www.uniprot.org/uniprot/P48454 P48454]
+
−
** [http://www.uniprot.org/uniprot/P35815 P35815]
+
−
** [http://www.uniprot.org/uniprot/Q92140 Q92140]
+
−
** [http://www.uniprot.org/uniprot/P87345 P87345]
+
−
** [http://www.uniprot.org/uniprot/Q9P982 Q9P982]
+
−
** [http://www.uniprot.org/uniprot/P48453 P48453]
+
−
** [http://www.uniprot.org/uniprot/P62138 P62138]
+
−
** [http://www.uniprot.org/uniprot/P20604 P20604]
+
−
** [http://www.uniprot.org/uniprot/P26570 P26570]
+
−
** [http://www.uniprot.org/uniprot/P23594 P23594]
+
−
** [http://www.uniprot.org/uniprot/P23595 P23595]
+
−
** [http://www.uniprot.org/uniprot/P32345 P32345]
+
−
** [http://www.uniprot.org/uniprot/P12982 P12982]
+
−
** [http://www.uniprot.org/uniprot/P11612 P11612]
+
−
** [http://www.uniprot.org/uniprot/P67777 P67777]
+
−
** [http://www.uniprot.org/uniprot/P67775 P67775]
+
−
** [http://www.uniprot.org/uniprot/P62714 P62714]
+
−
** [http://www.uniprot.org/uniprot/P62139 P62139]
+
−
** [http://www.uniprot.org/uniprot/P11611 P11611]
+
−
** [http://www.uniprot.org/uniprot/P11084 P11084]
+
−
** [http://www.uniprot.org/uniprot/P63331 P63331]
+
−
** [http://www.uniprot.org/uniprot/P62716 P62716]
+
−
** [http://www.uniprot.org/uniprot/P23734 P23734]
+
−
** [http://www.uniprot.org/uniprot/P23696 P23696]
+
−
** [http://www.uniprot.org/uniprot/P23777 P23777]
+
−
** [http://www.uniprot.org/uniprot/P48461 P48461]
+
−
** [http://www.uniprot.org/uniprot/P48462 P48462]
+
−
** [http://www.uniprot.org/uniprot/P62143 P62143]
+
−
** [http://www.uniprot.org/uniprot/P23287 P23287]
+
−
** [http://www.uniprot.org/uniprot/Q8AVH9 Q8AVH9]
+
−
** [http://www.uniprot.org/uniprot/P35814 P35814]
+
−
** [http://www.uniprot.org/uniprot/P35813 P35813]
+
−
** [http://www.uniprot.org/uniprot/P48482 P48482]
+
−
** [http://www.uniprot.org/uniprot/P48485 P48485]
+
−
** [http://www.uniprot.org/uniprot/P48487 P48487]
+
−
** [http://www.uniprot.org/uniprot/Q9PSQ6 Q9PSQ6]
+
−
** [http://www.uniprot.org/uniprot/Q95097 Q95097]
+
−
** [http://www.uniprot.org/uniprot/P22198 P22198]
+
−
** [http://www.uniprot.org/uniprot/Q05547 Q05547]
+
−
** [http://www.uniprot.org/uniprot/P48483 P48483]
+
−
** [http://www.uniprot.org/uniprot/P48484 P48484]
+
−
** [http://www.uniprot.org/uniprot/Q07099 Q07099]
+
−
** [http://www.uniprot.org/uniprot/Q07098 Q07098]
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−
** [http://www.uniprot.org/uniprot/Q07100 Q07100]
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−
** [http://www.uniprot.org/uniprot/P32598 P32598]
+
−
** [http://www.uniprot.org/uniprot/P36877 P36877]
+
−
** [http://www.uniprot.org/uniprot/Q08209 Q08209]
+
−
** [http://www.uniprot.org/uniprot/Q06009 Q06009]
+
−
** [http://www.uniprot.org/uniprot/P33329 P33329]
+
−
** [http://www.uniprot.org/uniprot/P36873 P36873]
+
−
** [http://www.uniprot.org/uniprot/P31383 P31383]
+
−
** [http://www.uniprot.org/uniprot/P48579 P48579]
+
−
** [http://www.uniprot.org/uniprot/P32945 P32945]
+
−
** [http://www.uniprot.org/uniprot/Q27884 Q27884]
+
−
** [http://www.uniprot.org/uniprot/P34221 P34221]
+
−
** [http://www.uniprot.org/uniprot/Q7M3E4 Q7M3E4]
+
−
** [http://www.uniprot.org/uniprot/P62140 P62140]
+
−
** [http://www.uniprot.org/uniprot/Q27889 Q27889]
+
−
** [http://www.uniprot.org/uniprot/P35182 P35182]
+
−
** [http://www.uniprot.org/uniprot/P48529 P48529]
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−
** [http://www.uniprot.org/uniprot/P48528 P48528]
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−
** [http://www.uniprot.org/uniprot/Q21513 Q21513]
+
−
** [http://www.uniprot.org/uniprot/P48488 P48488]
+
−
** [http://www.uniprot.org/uniprot/P48457 P48457]
+
−
** [http://www.uniprot.org/uniprot/P38089 P38089]
+
−
** [http://www.uniprot.org/uniprot/P14747 P14747]
+
−
** [http://www.uniprot.org/uniprot/P48490 P48490]
+
−
** [http://www.uniprot.org/uniprot/P53041 P53041]
+
−
** [http://www.uniprot.org/uniprot/P53043 P53043]
+
−
** [http://www.uniprot.org/uniprot/P48578 P48578]
+
−
** [http://www.uniprot.org/uniprot/P49598 P49598]
+
−
** [http://www.uniprot.org/uniprot/P48580 P48580]
+
−
** [http://www.uniprot.org/uniprot/P32838 P32838]
+
−
** [http://www.uniprot.org/uniprot/Q63759 Q63759]
+
−
** [http://www.uniprot.org/uniprot/Q14738 Q14738]
+
−
** [http://www.uniprot.org/uniprot/Q27560 Q27560]
+
−
** [http://www.uniprot.org/uniprot/Q38845 Q38845]
+
−
** [http://www.uniprot.org/uniprot/Q8L7U5 Q8L7U5]
+
−
** [http://www.uniprot.org/uniprot/P48489 P48489]
+
−
** [http://www.uniprot.org/uniprot/Q42981 Q42981]
+
−
** [http://www.uniprot.org/uniprot/O04856 O04856]
+
−
** [http://www.uniprot.org/uniprot/O04857 O04857]
+
−
** [http://www.uniprot.org/uniprot/O04858 O04858]
+
−
** [http://www.uniprot.org/uniprot/O04859 O04859]
+
−
** [http://www.uniprot.org/uniprot/O04860 O04860]
+
−
** [http://www.uniprot.org/uniprot/Q40556 Q40556]
+
−
** [http://www.uniprot.org/uniprot/P49597 P49597]
+
−
** [http://www.uniprot.org/uniprot/O65844 O65844]
+
−
** [http://www.uniprot.org/uniprot/O65845 O65845]
+
−
** [http://www.uniprot.org/uniprot/O65846 O65846]
+
−
** [http://www.uniprot.org/uniprot/O65847 O65847]
+
−
** [http://www.uniprot.org/uniprot/O81955 O81955]
+
−
** [http://www.uniprot.org/uniprot/O81956 O81956]
+
−
** [http://www.uniprot.org/uniprot/Q50188 Q50188]
+
−
** [http://www.uniprot.org/uniprot/P48486 P48486]
+
−
** [http://www.uniprot.org/uniprot/Q42912 Q42912]
+
−
** [http://www.uniprot.org/uniprot/O18148 O18148]
+
−
** [http://www.uniprot.org/uniprot/O14189 O14189]
+
−
** [http://www.uniprot.org/uniprot/Q10298 Q10298]
+
−
** [http://www.uniprot.org/uniprot/O01921 O01921]
+
−
** [http://www.uniprot.org/uniprot/Q94374 Q94374]
+
−
** [http://www.uniprot.org/uniprot/Q94372 Q94372]
+
−
** [http://www.uniprot.org/uniprot/Q94371 Q94371]
+
−
** [http://www.uniprot.org/uniprot/Q94370 Q94370]
+
−
** [http://www.uniprot.org/uniprot/Q12705 Q12705]
+
−
** [http://www.uniprot.org/uniprot/O49346 O49346]
+
−
** [http://www.uniprot.org/uniprot/O82469 O82469]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=formin_domain_containing_protein}}
+
−
{{#set: common name=formin-like_protein_14}}
+
−
{{#set: common name=protein_phosphatase_1}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=serine_threonine-protein_phosphatase}}
+
−
{{#set: common name=serine_threonine_protein_phosphatase_2a}}
+
−
{{#set: common name=serine_threonine-phosphatase}}
+
−
{{#set: common name=protein_phosphatase}}
+
−
{{#set: common name=dual_specificity_phosphatase}}
+
−
{{#set: common name=protein_phosphatase_2c}}
+
−
{{#set: ec number=EC-3.1.3.16}}
+
−
{{#set: gene associated=Tiso_gene_5305|Tiso_gene_3751|Tiso_gene_2034|Tiso_gene_11870|Tiso_gene_1840|Tiso_gene_18502|Tiso_gene_16524|Tiso_gene_15788|Tiso_gene_13371|Tiso_gene_4137|Tiso_gene_452|Tiso_gene_19603|Tiso_gene_12379|Tiso_gene_15176|Tiso_gene_4164|Tiso_gene_17314|Tiso_gene_20309|Tiso_gene_10912|Tiso_gene_7035|Tiso_gene_2578|Tiso_gene_16525|Tiso_gene_12989|Tiso_gene_2190|Tiso_gene_7036|Tiso_gene_453|Tiso_gene_18472|Tiso_gene_1395|Tiso_gene_15559}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:21, 21 March 2018

Gene Tiso_gene_9531

  • right end position:
    • 5385
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3645
  • centisome position:
    • 39.35435
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9531&oldid=48110"