Difference between revisions of "MCDH 2mb2coa"

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(Created page with "Category:Gene == Gene Tiso_gene_14984 == * right end position: ** 5089 * transcription direction: ** NEGATIVE * left end position: ** 3186 * centisome position: ** 60.0678...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH_2mb2coa MCDH_2mb2coa] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methylacyl-coa dehy...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_14984 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH_2mb2coa MCDH_2mb2coa] ==
* right end position:
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* direction:
** 5089
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** NEGATIVE
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** 2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming
* left end position:
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** 3186
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* centisome position:
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** 60.067875   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* With identifiers:
** Source: [[annotation-in-silico_annotation]]
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** 1.0 [[2-METHYL-BUTYRYL-COA]][m] '''+''' 1.0 [[FAD]][m] '''=>''' 1.0 [[FADH2]][m] '''+''' 1.0 [[CPD-1083]][m]
*** Assignment: ec-number
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* With common name(s):
** Source: [[annotation-experimental_annotation]]
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** 1.0 2-methylbutanoyl-CoA[m] '''+''' 1.0 FAD[m] '''=>''' 1.0 FADH2[m] '''+''' 1.0 (E)-2-methylcrotonoyl-CoA[m]
*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
** Source: [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10643]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_16113]]
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** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
* Reaction: [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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*** Tool: [[pantograph]]
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
+
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
+
** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[ILEUSYN-PWY]]
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* [[ILEUDEG-PWY]]
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* [[LEU-DEG2-PWY]]
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* [[VALDEG-PWY]]
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* [[PWY-5057]]
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* [[VALSYN-PWY]]
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* [[PWY-7767]]
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* [[PWY-5108]]
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* [[PWY-5076]]
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* [[PWY-5103]]
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* [[PWY-5101]]
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* [[PWY-5078]]
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* [[ALANINE-VALINESYN-PWY]]
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* [[LEUSYN-PWY]]
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* [[PWY-5104]]
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== External links  ==
 
== External links  ==
{{#set: right end position=5089}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming}}
{{#set: left end position=3186}}
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{{#set: gene associated=Tiso_gene_10643|Tiso_gene_16113}}
{{#set: centisome position=60.067875    }}
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{{#set: in pathway=}}
{{#set: reaction associated=BRANCHED-CHAINAMINOTRANSFERILEU-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
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{{#set: reconstruction category=orthology}}
{{#set: pathway associated=ILEUSYN-PWY|ILEUDEG-PWY|LEU-DEG2-PWY|VALDEG-PWY|PWY-5057|VALSYN-PWY|PWY-7767|PWY-5108|PWY-5076|PWY-5103|PWY-5101|PWY-5078|ALANINE-VALINESYN-PWY|LEUSYN-PWY|PWY-5104}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:22, 21 March 2018

Reaction MCDH_2mb2coa

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-methylbutanoyl-CoA[m] + 1.0 FAD[m] => 1.0 FADH2[m] + 1.0 (E)-2-methylcrotonoyl-CoA[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links