Difference between revisions of "Tiso gene 2337"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTAMINOTRANS-RXN HISTAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** histidino...")
(Created page with "Category:Gene == Gene Tiso_gene_2337 == * right end position: ** 2648 * transcription direction: ** POSITIVE * left end position: ** 1085 * centisome position: ** 5.484507...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTAMINOTRANS-RXN HISTAMINOTRANS-RXN] ==
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== Gene Tiso_gene_2337 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2648
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* common name:
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* transcription direction:
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** histidinol_phosphateaminotransferase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.6.1.9 EC-2.6.1.9]
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** 1085
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* centisome position:
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** 5.484507   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 1 [[IMIDAZOLE-ACETOL-P]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[L-HISTIDINOL-P]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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* With common name(s):
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** 1 imidazole acetol-phosphate[c] '''+''' 1 L-glutamate[c] '''=>''' 1 L-histidinol-phosphate[c] '''+''' 1 2-oxoglutarate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10680]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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** Source: [[orthology-creinhardtii]]
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* [[GLUTAMATE-DEG1-PWY]]
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* Gene: [[Tiso_gene_10679]]
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* [[ALACAT2-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[P162-PWY]]
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*** Assignment: EC-NUMBER
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* [[PWY-5022]]
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== Pathways ==
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* [[PWY-6728]]
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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* [[PWY-7126]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2648}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23744 23744]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1085}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03243 R03243]
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{{#set: centisome position=5.484507    }}
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* UNIPROT:
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{{#set: reaction associated=GLUTAMATE-DEHYDROGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/P17731 P17731]
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{{#set: pathway associated=GLUTAMATE-DEG1-PWY|ALACAT2-PWY|P162-PWY|PWY-5022|PWY-6728|PWY-7126}}
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** [http://www.uniprot.org/uniprot/P17736 P17736]
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** [http://www.uniprot.org/uniprot/P56099 P56099]
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** [http://www.uniprot.org/uniprot/Q9PII2 Q9PII2]
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** [http://www.uniprot.org/uniprot/Q02135 Q02135]
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** [http://www.uniprot.org/uniprot/Q58365 Q58365]
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** [http://www.uniprot.org/uniprot/Q9JTH8 Q9JTH8]
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** [http://www.uniprot.org/uniprot/P44423 P44423]
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** [http://www.uniprot.org/uniprot/P16246 P16246]
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** [http://www.uniprot.org/uniprot/P28735 P28735]
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** [http://www.uniprot.org/uniprot/P36605 P36605]
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** [http://www.uniprot.org/uniprot/P07172 P07172]
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** [http://www.uniprot.org/uniprot/O82030 O82030]
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** [http://www.uniprot.org/uniprot/Q9X7B8 Q9X7B8]
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** [http://www.uniprot.org/uniprot/P10369 P10369]
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** [http://www.uniprot.org/uniprot/P06986 P06986]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=histidinol_phosphateaminotransferase}}
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{{#set: ec number=EC-2.6.1.9}}
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{{#set: gene associated=Tiso_gene_10680|Tiso_gene_10679}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_2337

  • right end position:
    • 2648
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1085
  • centisome position:
    • 5.484507
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2337&oldid=48453"