Difference between revisions of "RXN-17857"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9653 RXN-9653] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17857 RXN-17857] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9653 RXN-9653] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17857 RXN-17857] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** polyketide_synthase
 
** 3-oxoacyl-synthase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Dodecanoyl-ACPs]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[L-methionyl-L-tryptophanyl-Protein]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[N-Ac-L-methionyl-L-tryptophanyl-Protein]][c]
 
* With common name(s):
 
* With common name(s):
** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 a dodecanoyl-[acp][c] '''=>''' 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
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** 1 acetyl-CoA[c] '''+''' 1 an N-terminal-L-methionyl-L-tryptophanyl-[protein][c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 an N-terminal Nα-acetyl-L-methionyl-L-tryptophanyl-[protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Tiso_gene_13394]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
* Gene: [[Tiso_gene_10876]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
* Gene: [[Tiso_gene_500]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
* Gene: [[Tiso_gene_135]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
* Gene: [[Tiso_gene_5939]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: EC-NUMBER
 
* Gene: [[Tiso_gene_15991]]
 
** Source: [[orthology-esiliculosus]]
 
* Gene: [[Tiso_gene_19302]]
 
** Source: [[orthology-esiliculosus]]
 
* Gene: [[Tiso_gene_14485]]
 
** Source: [[orthology-esiliculosus]]
 
* Gene: [[Tiso_gene_136]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
** '''31''' reactions found over '''31''' reactions in the full pathway
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** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=polyketide_synthase}}
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{{#set: ec number=EC-2.3.1.bv}}
{{#set: common name=3-oxoacyl-synthase}}
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{{#set: in pathway=PWY-7800}}
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: reconstruction category=annotation}}
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: ec number=EC-2.3.1.41}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_135|Tiso_gene_5939|Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_136}}
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{{#set: in pathway=PWY-5994}}
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{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:24, 21 March 2018

Reaction RXN-17857

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links