Difference between revisions of "SUC-COA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLVALERATE-RXN METHYLVALERATE-RXN] == * direction: ** REVERSIBLE * common name: ** 3-methyl-2-o...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUC-COA SUC-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLVALERATE-RXN METHYLVALERATE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUC-COA SUC-COA] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** 3-methyl-2-oxobutanoate dehydrogenase [(S)-2-methylbutanoyl-transferring)
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** succinyl-CoA
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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* inchi key:
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* ec number:
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** InChIKey=VNOYUJKHFWYWIR-ITIYDSSPSA-I
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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* molecular weight:
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** 862.568   
 
* Synonym(s):
 
* Synonym(s):
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** suc-coa
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** succ-coenzyme-A
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** succ-S-coenzyme-A
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** succinyl-S-coenzyme-A
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** succ-S-CoA
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** succinylcoenzyme-A
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** succ-CoA
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** suc-co-A
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** succinyl-S-CoA
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** succinyl-coenzyme A
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[3-OXOACID-COA-TRANSFERASE-RXN]]
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** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 H+[c] '''<=>''' 1 an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylbutanoyl]dihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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* [[RXN0-1147]]
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* [[SUCL_gdp_m]]
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== Genes associated with this reaction  ==
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* [[RXNI-2]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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* Gene: [[Tiso_gene_18084]]
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* [[SUCCCOASYN-RXN]]
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** Source: [[orthology-esiliculosus]]
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* [[METHYLMALONYL-COA-MUT-RXN]]
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* Gene: [[Tiso_gene_3260]]
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* [[AKGDHe2r]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* CAS : 604-98-8
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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* BIGG : succoa
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266545 45266545]
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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* HMDB : HMDB01022
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.genome.jp/dbget-bin/www_bget?C00091 C00091]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57292 57292]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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* METABOLIGHTS : MTBLC57292
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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{{#set: common name=succinyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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{{#set: inchi key=InChIKey=VNOYUJKHFWYWIR-ITIYDSSPSA-I}}
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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{{#set: molecular weight=862.568    }}
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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{{#set: common name=suc-coa|succ-coenzyme-A|succ-S-coenzyme-A|succinyl-S-coenzyme-A|succ-S-CoA|succinylcoenzyme-A|succ-CoA|suc-co-A|succinyl-S-CoA|succinyl-coenzyme A}}
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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{{#set: reversible reaction associated=3-OXOACID-COA-TRANSFERASE-RXN|RXN0-1147|SUCL_gdp_m|RXNI-2|SUCCINATE--COA-LIGASE-GDP-FORMING-RXN|SUCCCOASYN-RXN|METHYLMALONYL-COA-MUT-RXN|AKGDHe2r}}
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-methyl-2-oxobutanoate dehydrogenase [(S)-2-methylbutanoyl-transferring)}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_18084|Tiso_gene_3260}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Metabolite SUC-COA

  • smiles:
    • CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • succinyl-CoA
  • inchi key:
    • InChIKey=VNOYUJKHFWYWIR-ITIYDSSPSA-I
  • molecular weight:
    • 862.568
  • Synonym(s):
    • suc-coa
    • succ-coenzyme-A
    • succ-S-coenzyme-A
    • succinyl-S-coenzyme-A
    • succ-S-CoA
    • succinylcoenzyme-A
    • succ-CoA
    • suc-co-A
    • succinyl-S-CoA
    • succinyl-coenzyme A

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 604-98-8
  • BIGG : succoa
  • PUBCHEM:
  • HMDB : HMDB01022
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57292
"CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)CCC(=O)[O-])COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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