Difference between revisions of "RXN-14228"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17783 RXN-17783] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA dehydrogenase ** a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14228 RXN-14228] == * direction: ** REVERSIBLE * common name: ** ORF ** adenylate_kinase_domain...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17783 RXN-17783] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14228 RXN-14228] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Acyl-CoA dehydrogenase
+
** ORF
−
** acyl-_dehydrogenase
+
** adenylate_kinase_domain-containing_protein_1
−
** acyl-CoA_dehydrogenase
+
** nucleoside_diphosphate_kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[CPD-15436]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD0-1162]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD0-2231]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[DITP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 (5Z)-tetradecenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,5Z)-tetradecenoyl-CoA[c]
+
** 1 ATP[c] '''+''' 1 dIDP[c] '''<=>''' 1 ADP[c] '''+''' 1 dITP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_5449]]
+
* Gene: [[Tiso_gene_195]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_16631]]
+
* Gene: [[Tiso_gene_16529]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_8271]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9290]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_6475]]
+
* Gene: [[Tiso_gene_17272]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_8272]]
+
* Gene: [[Tiso_gene_17271]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_16113]]
+
* Gene: [[Tiso_gene_18224]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=Acyl-CoA dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30942 30942]
−
{{#set: common name=acyl-_dehydrogenase}}
+
* LIGAND-RXN:
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03530 R03530]
−
{{#set: ec number=EC-1.3.8}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=Tiso_gene_5449|Tiso_gene_16631|Tiso_gene_8271|Tiso_gene_6475|Tiso_gene_8272|Tiso_gene_16113}}
+
{{#set: common name=ORF}}
 +
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
 +
{{#set: common name=nucleoside_diphosphate_kinase}}
 +
{{#set: ec number=EC-2.7.4.6}}
 +
{{#set: gene associated=Tiso_gene_195|Tiso_gene_16529|Tiso_gene_9290|Tiso_gene_17272|Tiso_gene_17271|Tiso_gene_18224}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction RXN-14228

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • adenylate_kinase_domain-containing_protein_1
    • nucleoside_diphosphate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dIDP[c] <=> 1 ADP[c] + 1 dITP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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