Difference between revisions of "RXN-17875"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FATTY-ACYL-COA-SYNTHASE-RXN FATTY-ACYL-COA-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FATTY-ACYL-COA-SYNTHASE-RXN FATTY-ACYL-COA-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** methionine_aminopeptidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2n [[NADPH]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 4n [[PROTON]][c] '''+''' n [[MALONYL-COA]][c] '''=>''' 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' n [[CO-A]][c] '''+''' 2n [[NADP]][c] '''+''' n [[CARBON-DIOXIDE]][c]
+
** 1 [[L-methionyl-glycyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-glycine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2n NADPH[c] '''+''' 1 acetyl-CoA[c] '''+''' 4n H+[c] '''+''' n malonyl-CoA[c] '''=>''' 1 a long-chain acyl-CoA[c] '''+''' n coenzyme A[c] '''+''' 2n NADP+[c] '''+''' n CO2[c]
+
** 1 an N-terminal-L-methionyl-glycyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal glycyl-[protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_500]]
+
* Gene: [[Tiso_gene_4247]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_13394]]
+
* Gene: [[Tiso_gene_5715]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_136]]
+
** Source: [[annotation-experimental_annotation]]
−
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_10876]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_135]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5970]], fatty acids biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5970 PWY-5970]
+
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05190 R05190]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P34229 P34229]
 
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
 
−
** [http://www.uniprot.org/uniprot/P34731 P34731]
 
−
** [http://www.uniprot.org/uniprot/Q9UUG0 Q9UUG0]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=methionine_aminopeptidase}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: ec number=EC-3.4.11.18}}
−
{{#set: gene associated=Tiso_gene_500|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_135}}
+
{{#set: gene associated=Tiso_gene_4247|Tiso_gene_5715}}
−
{{#set: in pathway=PWY-5970}}
+
{{#set: in pathway=PWY-7800}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:26, 21 March 2018

Reaction RXN-17875

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17875&oldid=48717"