Difference between revisions of "D-Xylopyranose"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.213-RXN 2.4.1.213-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRIN_IX PROTOPORPHYRIN_IX] == * smiles: ** C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.213-RXN 2.4.1.213-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROTOPORPHYRIN_IX PROTOPORPHYRIN_IX] ==
* direction:
+
* smiles:
** REVERSIBLE
+
** C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))
* ec number:
+
* inchi key:
** [http://enzyme.expasy.org/EC/2.4.1.213 EC-2.4.1.213]
+
** InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L
 +
* common name:
 +
** protoporphyrin IX
 +
* molecular weight:
 +
** 560.651   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[RXN1F-20]]
** 1 [[ADP-D-GLUCOSE]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-18011]][c] '''+''' 1 [[PROTON]][c]
+
== Reaction(s) known to produce the compound ==
* With common name(s):
+
* [[PROTOPORGENOXI-RXN]]
** 1 ADP-&alpha;-D-glucose[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''<=>''' 1 ADP[c] '''+''' 1 2-O-(&alpha;-D-glucopyranosyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c]
+
* [[PPPGO]]
 
+
== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
+
* [[PROTOHEMEFERROCHELAT-RXN]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_18196]]
+
** [[pantograph]]-[[synechocystis]]
+
* [[Tiso_gene_6869]]
+
** [[pantograph]]-[[synechocystis]]
+
* [[Tiso_gene_14220]]
+
** [[pantograph]]-[[synechocystis]]
+
== Pathways  ==
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[synechocystis]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
* CAS : 553-12-8
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12881 12881]
+
* PUBCHEM:
* LIGAND-RXN:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3794562 3794562]
** [http://www.genome.jp/dbget-bin/www_bget?R05328 R05328]
+
* HMDB : HMDB00241
{{#set: direction=REVERSIBLE}}
+
* LIGAND-CPD:
{{#set: ec number=EC-2.4.1.213}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C02191 C02191]
{{#set: gene associated=Tiso_gene_18196|Tiso_gene_6869|Tiso_gene_14220}}
+
* CHEMSPIDER:
{{#set: in pathway=}}
+
** [http://www.chemspider.com/Chemical-Structure.20171337.html 20171337]
{{#set: reconstruction category=orthology}}
+
* CHEBI:
{{#set: reconstruction tool=pantograph}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57306 57306]
{{#set: reconstruction source=synechocystis}}
+
* BIGG : ppp9
 +
{{#set: smiles=C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))}}
 +
{{#set: inchi key=InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L}}
 +
{{#set: common name=protoporphyrin IX}}
 +
{{#set: molecular weight=560.651    }}
 +
{{#set: consumed by=RXN1F-20}}
 +
{{#set: produced by=PROTOPORGENOXI-RXN|PPPGO}}
 +
{{#set: consumed or produced by=PROTOHEMEFERROCHELAT-RXN}}

Revision as of 16:33, 10 January 2018

Metabolite PROTOPORPHYRIN_IX

  • smiles:
    • C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))
  • inchi key:
    • InChIKey=KSFOVUSSGSKXFI-UJJXFSCMSA-L
  • common name:
    • protoporphyrin IX
  • molecular weight:
    • 560.651
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=CC1(C(C)=C2(C=C5(C(C)=C(CCC([O-])=O)C(C=C4(C(CCC([O-])=O)=C(C)C(=CC3(C(C=C)=C(C)C(=CC=1N2)N=3))N4))=N5)))" cannot be used as a page name in this wiki.