Difference between revisions of "Oxo-glutarate-dehydro-suc-DH-lipoyl"

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(Created page with "Category:Gene == Gene Tiso_gene_883 == * left end position: ** 16636 * transcription direction: ** POSITIVE * right end position: ** 19396 * centisome position: ** 59.7536...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16129 RXN-16129] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_883 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16129 RXN-16129] ==
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* left end position:
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* direction:
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** 16636
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** chloroplast_beta-keto_acyl_reductase
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* right end position:
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* ec number:
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** 19396
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* centisome position:
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** 59.7536   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYLCOADEHYDROG-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-17332]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-17382]][c]
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* [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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* With common name(s):
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** experimental_annotation
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** 1 NADPH[c] '''+''' 1 3-oxo-tetracosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-hydroxy-tetracosapentaenoyl-CoA[c]
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***ec-number
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-11734]]
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* [[Tiso_gene_9871]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-13451]]
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** EXPERIMENTAL_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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== Pathways  ==
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* [[RXN-13615]]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** experimental_annotation
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** '''14''' reactions found over '''14''' reactions in the full pathway
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***ec-number
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== Reconstruction information  ==
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* [[RXN-14131]]
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* [[annotation]]:
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** experimental_annotation
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** [[pathwaytools]]:
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***ec-number
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*** [[experimental_annotation]]
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* [[RXN-14229]]
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*** [[in-silico_annotation]]
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** experimental_annotation
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***ec-number
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* [[RXN-14262]]
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** experimental_annotation
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***ec-number
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* [[RXN-14278]]
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** experimental_annotation
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***ec-number
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* [[RXN-16540]]
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** experimental_annotation
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***ec-number
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* [[RXN-16557]]
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=16636}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: right end position=19396}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: centisome position=59.7536    }}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14229|RXN-14262|RXN-14278|RXN-16540|RXN-16557}}
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{{#set: in pathway=PWY-7606}}
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{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:35, 10 January 2018

Reaction RXN-16129

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 3-oxo-tetracosapentaenoyl-CoA[c] + 1 H+[c] => 1 NADP+[c] + 1 (3R)-hydroxy-tetracosapentaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_9871
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Oxo-glutarate-dehydro-suc-DH-lipoyl&oldid=9645"