Difference between revisions of "5-METHYL-THF"

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(Created page with "Category:Gene == Gene Tiso_gene_13079 == * left end position: ** 3091 * transcription direction: ** POSITIVE * right end position: ** 6032 * centisome position: ** 47.2052...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_13079 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520] ==
* left end position:
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* direction:
** 3091
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** polyketide_synthase
* right end position:
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* ec number:
** 6032
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
** 47.205254   
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[RXN-13374]]
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* With identifiers:
** in-silico_annotation
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** 1 [[R-3-hydroxyhexanoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Hex-2-enoyl-ACPs]][c]
***ec-number
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* With common name(s):
== Pathways associated ==
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** 1 a (3R)-3-hydroxyhexanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans hex-2-enoyl-[acp][c]
* [[PWY-6857]]
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 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3091}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
{{#set: right end position=6032}}
+
{{#set: ec number=EC-2.3.1.86}}
{{#set: centisome position=47.205254    }}
+
{{#set: ec number=EC-2.3.1.85}}
{{#set: reaction associated=RXN-13374}}
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{{#set: ec number=EC-4.2.1.59}}
{{#set: pathway associated=PWY-6857}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_6884}}
 +
{{#set: in pathway=PWY-5971|PWY-5994}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:35, 10 January 2018

Reaction RXN-9520

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links