Difference between revisions of "5-METHYL-THF"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13079 == * left end position: ** 3091 * transcription direction: ** POSITIVE * right end position: ** 6032 * centisome position: ** 47.2052...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** polyketide_synthase |
− | * | + | * ec number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86] |
− | * | + | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85] |
− | ** | + | ** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59] |
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** | + | ** 1 [[R-3-hydroxyhexanoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Hex-2-enoyl-ACPs]][c] |
− | *** | + | * With common name(s): |
− | == Pathways | + | ** 1 a (3R)-3-hydroxyhexanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans hex-2-enoyl-[acp][c] |
− | * [[PWY- | + | |
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_500]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_135]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_10876]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_13394]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_136]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_6884]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | == Pathways == | ||
+ | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971] | ||
+ | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
+ | * [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] | ||
+ | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * [[manual]]: | ||
+ | ** [[primary_network]] | ||
+ | * [[annotation]]: | ||
+ | ** [[pathwaytools]]: | ||
+ | *** [[experimental_annotation]] | ||
+ | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
− | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: | + | {{#set: common name=polyketide_synthase}} |
− | {{#set: | + | {{#set: ec number=EC-2.3.1.86}} |
− | {{#set: | + | {{#set: ec number=EC-2.3.1.85}} |
− | {{#set: | + | {{#set: ec number=EC-4.2.1.59}} |
− | {{#set: | + | {{#set: gene associated=Tiso_gene_500|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_6884}} |
+ | {{#set: in pathway=PWY-5971|PWY-5994}} | ||
+ | {{#set: reconstruction category=manual}} | ||
+ | {{#set: reconstruction source=primary_network}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} |
Revision as of 15:35, 10 January 2018
Contents
Reaction RXN-9520
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 R-3-hydroxyhexanoyl-ACPs[c] => 1 WATER[c] + 1 Hex-2-enoyl-ACPs[c]
- With common name(s):
- 1 a (3R)-3-hydroxyhexanoyl-[acp][c] => 1 H2O[c] + 1 a trans hex-2-enoyl-[acp][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_500
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_135
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_10876
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_13394
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_136
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_6884
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- EXPERIMENTAL_ANNOTATION
Pathways
- PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
- 31 reactions found over 31 reactions in the full pathway
- PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
- 31 reactions found over 31 reactions in the full pathway