Difference between revisions of "BIOTINLIG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16363 == * left end position: ** 1733 * transcription direction: ** POSITIVE * right end position: ** 2408 * centisome position: ** 39.2170...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] ==
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== Gene Tiso_gene_16363 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1733
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.4.15 EC-6.3.4.15]
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** 2408
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* centisome position:
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** 39.217014   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
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** 1 [[BCCP-monomers]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[BCCP-biotin-monomers]][c] '''+''' 1 [[AMP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a [biotin-carboxyl-carrier protein monomer][c] '''+''' 1 biotin[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 a biotinylated [BCCP monomer][c] '''+''' 1 AMP[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8713]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17216]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=1733}}
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** [http://www.uniprot.org/uniprot/P06709 P06709]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/Q9PJ27 Q9PJ27]
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{{#set: right end position=2408}}
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** [http://www.uniprot.org/uniprot/Q9CEQ6 Q9CEQ6]
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{{#set: centisome position=39.217014    }}
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** [http://www.uniprot.org/uniprot/Q9CED9 Q9CED9]
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{{#set: reaction associated=RNA-DIRECTED-DNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JWI7 Q9JWI7]
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** [http://www.uniprot.org/uniprot/P48445 P48445]
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** [http://www.uniprot.org/uniprot/P72816 P72816]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-6.3.4.15}}
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{{#set: gene associated=Tiso_gene_14184|Tiso_gene_8713|Tiso_gene_17216}}
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{{#set: in pathway=PWY0-1264}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 15:38, 10 January 2018

Gene Tiso_gene_16363

  • left end position:
    • 1733
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2408
  • centisome position:
    • 39.217014
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=BIOTINLIG-RXN&oldid=9871"