PWY-6539

Reaction UROGENDECARBOX-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • uroporphyrinogen_decarboxylase
  • uroporphyrinogen_chloroplast
• ec number:
  • EC-4.1.1.37
• Synonym(s):

Reaction Formula

• With identifiers:
  • 4 PROTON[c] + 1 UROPORPHYRINOGEN-III[c] => 4 CARBON-DIOXIDE[c] + 1 COPROPORPHYRINOGEN_III[c]
• With common name(s):
  • 4 H+[c] + 1 uroporphyrinogen-III[c] => 4 CO2[c] + 1 coproporphyrinogen III[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Tiso_gene_18743
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
  • pantograph-esiliculosus
• Tiso_gene_19684
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
  • pantograph-esiliculosus
• Tiso_gene_18744
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • pantograph-esiliculosus
• Tiso_gene_5173
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
  • pantograph-synechocystis
  • pantograph-esiliculosus
  • pantograph-creinhardtii

Pathways

• HEMESYN2-PWY, heme biosynthesis II (anaerobic): HEMESYN2-PWY
  • 3 reactions found over 4 reactions in the full pathway
• PWY0-1415, superpathway of heme biosynthesis from uroporphyrinogen-III: PWY0-1415
  • 5 reactions found over 6 reactions in the full pathway
• PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
  • 8 reactions found over 9 reactions in the full pathway
• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
  • 4 reactions found over 9 reactions in the full pathway
• CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
  • 9 reactions found over 9 reactions in the full pathway
• PWY-7766, heme biosynthesis IV (Gram-positive bacteria): PWY-7766
  • 1 reactions found over 4 reactions in the full pathway
• HEME-BIOSYNTHESIS-II, heme biosynthesis I (aerobic): HEME-BIOSYNTHESIS-II
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-creinhardtii
    • Tool: pantograph
  • Source: orthology-synechocystis
    • Tool: pantograph
  • Source: orthology-esiliculosus
    • Tool: pantograph
• Category: manual
  • Source: manual-primary_network
• Category: annotation
  • Source: annotation-experimental_annotation
    • Tool: pathwaytools
  • Source: annotation-in-silico_annotation
    • Tool: pathwaytools

External links

• RHEA:
  • 19865
• LIGAND-RXN:
  • R03197
• UNIPROT:
  • P06132
  • P16891
  • P32395
  • Q9PN54
  • Q9JV52
  • P29680
  • P32347
  • P32920
  • P54224
  • O81220
  • P70697