Tiso gene 13100

Reaction RXN-9535

• direction:
  • LEFT-TO-RIGHT
• common name:
  • polyketide_synthase
  • 3-oxoacyl-synthase
• ec number:
  • EC-2.3.1.86
  • EC-2.3.1.85
  • EC-2.3.1.41
• Synonym(s):
  • β-ketoacyl-ACP synthase I
  • β-ketoacyl-acyl carrier protein synthetase
  • β-ketoacyl-[acyl carrier protein] synthase
  • condensing enzyme
  • β-ketoacyl acyl carrier protein synthase
  • 3-oxoacyl-[acyl-carrier-protein] synthase
  • acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)

Reaction Formula

• With identifiers:
  • 1 MALONYL-ACP[c] + 1 Dodecanoyl-ACPs[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 3-oxo-myristoyl-ACPs[c] + 1 ACP[c]
• With common name(s):
  • 1 a malonyl-[acp][c] + 1 a dodecanoyl-[acp][c] + 1 H+[c] => 1 CO2[c] + 1 a 3-oxo-myristoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Tiso_gene_500
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_13394
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_15991
  • Source: orthology-athaliana
  • Source: orthology-athaliana
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_14485
  • Source: orthology-synechocystis
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_135
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_19302
  • Source: orthology-synechocystis
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_10876
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_5939
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_136
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER

Pathways

• PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
  • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-athaliana
    • Tool: pantograph
  • Source: orthology-synechocystis
    • Tool: pantograph
  • Source: orthology-esiliculosus
    • Tool: pantograph
• Category: manual
  • Source: manual-primary_network
• Category: annotation
  • Source: annotation-experimental_annotation
    • Tool: pathwaytools
  • Source: annotation-in-silico_annotation
    • Tool: pathwaytools

External links

• "β-ketoacyl-[acyl carrier protein] synthase" cannot be used as a page name in this wiki.
• "3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.
• "acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" cannot be used as a page name in this wiki.