RXN-11109

Reaction RXN-11109

• direction:
  • LEFT-TO-RIGHT
• common name:
  • atp-dependent_rna_helicase_ded1
  • rna_helicase
  • dead_box_rna_helicase
  • ORF
  • dead_box_helicase
  • atp-dependent_rna_helicase-like_protein_db10
• ec number:
  • EC-3.6.4.13
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Wound-RNA[c] + 1 ATP[c] + 1 WATER[c] => 1 Pi[c] + 1 ADP[c] + 1 Unwound-RNA[c] + 1 PROTON[c]
• With common name(s):
  • 1 wound RNA[c] + 1 ATP[c] + 1 H2O[c] => 1 phosphate[c] + 1 ADP[c] + 1 an unwound RNA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Tiso_gene_13862
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_15465
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_11551
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_5272
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_17804
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_9370
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Tiso_gene_13864
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_14774
  • Source: annotation-in-silico_annotation
    • Assignment: AUTOMATED-NAME-MATCH
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_17819
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_13863
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER

Reconstruction information

• Category: orthology
  • Source: orthology-esiliculosus
    • Tool: pantograph
• Category: manual
  • Source: manual-primary_network
• Category: annotation
  • Source: annotation-experimental_annotation
    • Tool: pathwaytools
  • Source: annotation-in-silico_annotation
    • Tool: pathwaytools