Manual-export biomass rxn

Reaction RXN0-5462

• direction:
  • LEFT-TO-RIGHT
• common name:
  • at1g33290
  • uridine_kinase
  • ORF
  • atp-dependent_metalloprotease
  • member_of_the_hsp104_clp_superfamily
  • katanin_p60_atpase-containing_subunit_a-like_2
  • helicase_mov-10-_-like
  • replication_factor_c_subunit_5
  • e3_ubiquitin-protein_ligase_rnf213-like
  • replication_factor_c_subunit_2
  • atpase_family_aaa_domain-containing_protein_2b-_partial
  • adenylate_guanylate
  • replication_factor_c_subunit_3
  • adenylate_kinase_domain-containing_protein_1
  • replication_control_protein_1_like
  • aaa_family_cdc48_subfamily
  • fidgetin-like_protein1
  • dna-binding_protein_smubp-2
  • atp-dependent_zinc_metalloprotease
  • gtpase
  • cytosolic_fe-s_cluster_assembly_factor_nubp1_homolog
  • uncharacterized_transmembrane_protein_ddb_g0290641
  • isoform_m_of_dna_helicase_mcm9
  • replication_factor_c_subunit_1
  • 26s_proteaseregulatorysubunit6bhomolog
  • atpase_family_associated_with_various_cellular_activities
  • nfx1-type_zinc_finger-containing_protein_1
  • gtpase_der
  • origin_recognition_complex_subunit_4
  • hsp104
  • atpase_afg2_protein
  • trna-splicing_endonuclease_positive_effector
  • sh2_domain_containing_protein
  • atp-dependent_proteaseatpasesubunit
  • atpase_aaa
• ec number:
  • EC-3.6.5.1
  • EC-3.6.5.2
  • EC-3.6.5.3
  • EC-3.6.5.4
  • EC-3.6.5.5
  • EC-3.6.5.6
  • EC-3.6.1.15
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 GTP[c] + 1 WATER[c] => 1 GDP[c] + 1 PROTON[c] + 1 Pi[c]
• With common name(s):
  • 1 GTP[c] + 1 H2O[c] => 1 GDP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Tiso_gene_199
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • pantograph-esiliculosus
• Tiso_gene_8859
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_14586
  • IN-SILICO_ANNOTATION
    • AUTOMATED-NAME-MATCH
• Tiso_gene_8950
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4194
  • pantograph-esiliculosus
• Tiso_gene_9234
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_14474
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_5529
  • pantograph-esiliculosus
• Tiso_gene_4330
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_537
  • pantograph-esiliculosus
• Tiso_gene_674
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_8584
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_14646
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4026
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_8763
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_5166
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_20353
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2447
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2924
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_1984
  • pantograph-esiliculosus
• Tiso_gene_13738
  • pantograph-esiliculosus
• Tiso_gene_1611
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_38
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_6180
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_9959
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_14816
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_8601
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2451
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2176
  • pantograph-esiliculosus
• Tiso_gene_2452
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_12899
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
  • pantograph-athaliana
  • pantograph-esiliculosus
• Tiso_gene_10282
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
• Tiso_gene_250
  • pantograph-esiliculosus
• Tiso_gene_13268
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_16478
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_195
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_9004
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
• Tiso_gene_17751
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • pantograph-esiliculosus
• Tiso_gene_8164
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_19098
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_8949
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_12149
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_16252
  • pantograph-esiliculosus
• Tiso_gene_14226
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_13325
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_15500
  • pantograph-esiliculosus
• Tiso_gene_14227
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • pantograph-esiliculosus
• Tiso_gene_8860
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2448
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_826
  • IN-SILICO_ANNOTATION
    • AUTOMATED-NAME-MATCH
• Tiso_gene_4092
  • pantograph-esiliculosus
• Tiso_gene_2929
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2889
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_829
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_546
  • pantograph-esiliculosus
• Tiso_gene_6181
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_7387
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_7123
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
• Tiso_gene_11012
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_7734
  • pantograph-esiliculosus
• Tiso_gene_538
  • pantograph-esiliculosus
• Tiso_gene_15043
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_1291
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4155
  • pantograph-esiliculosus
• Tiso_gene_4437
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2631
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_15320
  • pantograph-esiliculosus
• Tiso_gene_1610
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_623
  • pantograph-esiliculosus
• Tiso_gene_2450
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2604
  • pantograph-esiliculosus
• Tiso_gene_572
  • pantograph-esiliculosus
• Tiso_gene_2068
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
• Tiso_gene_3287
  • pantograph-esiliculosus
• Tiso_gene_7745
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_9114
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4596
  • pantograph-esiliculosus
• Tiso_gene_20327
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_17449
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_8461
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_1541
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_14239
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_13653
  • EXPERIMENTAL_ANNOTATION
    • AUTOMATED-NAME-MATCH
• Tiso_gene_10221
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_12148
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_9926
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4436
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2449
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_3653
  • pantograph-esiliculosus
• Tiso_gene_9423
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_5525
  • pantograph-esiliculosus
• Tiso_gene_13264
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_9243
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_9659
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_20236
  • pantograph-esiliculosus
• Tiso_gene_1959
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4726
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_13681
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_2897
  • pantograph-esiliculosus
• Tiso_gene_873
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_11098
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_1960
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_4192
  • pantograph-esiliculosus
• Tiso_gene_15465
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_17616
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_1444
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
  • EXPERIMENTAL_ANNOTATION
    • EC-NUMBER
• Tiso_gene_19350
  • IN-SILICO_ANNOTATION
    • EC-NUMBER
• Tiso_gene_6614
  • IN-SILICO_ANNOTATION
    • EC-NUMBER

Reconstruction information

• orthology:
  • pantograph:
    • athaliana
    • esiliculosus
• annotation:
  • pathwaytools:
    • experimental_annotation
    • in-silico_annotation

External links

• RHEA:
  • 19669
• LIGAND-RXN:
  • R00335