Tiso gene 16754

Reaction SERINE--TRNA-LIGASE-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • ORF
  • structural_maintenance_of_chromosomes_protein_6
• ec number:
  • EC-6.1.1.11
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 SER-tRNAs[c] + 1 SER[c] => 1 Charged-SER-tRNAs[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 ATP[c] + 1 a tRNAser[c] + 1 L-serine[c] => 1 an L-seryl-[tRNAser][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Tiso_gene_1682
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_10015
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
• Gene: Tiso_gene_587
  • Source: annotation-experimental_annotation
    • Assignment: EC-NUMBER
  • Source: orthology-esiliculosus
• Gene: Tiso_gene_1684
  • Source: annotation-in-silico_annotation
    • Assignment: EC-NUMBER
  • Source: orthology-esiliculosus

Pathways

• TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
  • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-esiliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-in-silico_annotation
    • Tool: pathwaytools
  • Source: annotation-experimental_annotation
    • Tool: pathwaytools

External links

• RHEA:
  • 12292
• LIGAND-RXN:
  • R03662
• UNIPROT:
  • Q9ZCG5
  • O51244
  • O66647
  • Q9PIB3
  • Q58477
  • O27194
  • O84734
  • Q9X199
  • P47251
  • Q9JT77
  • O83653
  • Q9Z736
  • P49591
  • P56458
  • Q9ZJD9
  • Q9CEX2
  • P43833
  • P26636
  • P39919
  • P37464
  • Q39230
  • P75107
  • P73201
  • O82108
  • O82110
  • O81983
  • O45887
  • O14018
  • P54221
  • P07284
  • P0A8L1