Semantic search

	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
CITSYN-RXN	EC-2.3.3.16 EC-2.3.3.1	Manual Annotation	Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation	Tiso gene 9602 Tiso gene 9601 Tiso gene 18030 Tiso gene 9603	PWY-5913 PWY-7124 PWY-6969 PWY66-398 REDCITCYC P105-PWY GLYOXYLATE-BYPASS FERMENTATION-PWY PWY-6728 PWY-6549 PWY-7254 PWY-5690 PWY-5750 TCA
CTPSYN-RXN	EC-6.3.4.2	Manual Annotation	Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation		PWY-7185 PWY-7176 PWY-7177
CYSTEINE--TRNA-LIGASE-RXN	EC-6.1.1.16	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 17657 Tiso gene 10881	TRNA-CHARGING-PWY
CYSTEINE-AMINOTRANSFERASE-RXN	EC-2.6.1.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Orthology-creinhardtii	Tiso gene 17718 Tiso gene 6815	PWY-5329 PWY0-1534
CYTOCHROME-C-OXIDASE-RXN	EC-1.9.3.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 18580 Tiso gene 7948 Tiso gene 15682 Tiso gene 18053	PWY-3781 PWY-7279 PWY-4521
CYTOCHROME-C-PEROXIDASE-RXN	EC-1.11.1.5	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 11607 Tiso gene 4992 Tiso gene 4990 Tiso gene 5435 Tiso gene 19683 Tiso gene 11606
DADPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 17271 Tiso gene 9290 Tiso gene 18224 Tiso gene 16529 Tiso gene 17272 Tiso gene 195	PWY-7220 PWY-7224 PWY-7227
DAHPSYN-RXN	EC-2.5.1.54	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 7372 Tiso gene 18937 Tiso gene 18975 Tiso gene 8935 Tiso gene 8934	PWY-6164
DCDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16529 Tiso gene 9290 Tiso gene 17271 Tiso gene 195 Tiso gene 17272 Tiso gene 18224	PWY-7210 PWY-7198 PWY-7184 PWY-7197 PWY0-166 PWY-6545
DGDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 195 Tiso gene 17272 Tiso gene 17271 Tiso gene 16529 Tiso gene 18224 Tiso gene 9290	PWY-7222 PWY-7224 PWY-7226
DIHYDROOROT-RXN	EC-3.5.2.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Orthology-creinhardtii Orthology-synechocystis Annotation-experimental annotation	Tiso gene 15379	PWY-7790 PWY-7791 PWY-5686
DIHYDROXYISOVALDEHYDRAT-RXN	EC-4.2.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-experimental annotation Orthology-athaliana Orthology-esiliculosus	Tiso gene 1563	VALSYN-PWY PWY-7111
DIHYDROXYMETVALDEHYDRAT-RXN	EC-4.2.1.9	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 1563	PWY-5103 ILEUSYN-PWY PWY-5101 PWY-5104
DISULISOM-RXN	EC-5.3.4.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 15704 Tiso gene 4246 Tiso gene 4244 Tiso gene 14313 Tiso gene 475 Tiso gene 7350
DNA-DIRECTED-DNA-POLYMERASE-RXN	EC-2.7.7.7	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 7195 Tiso gene 6588 Tiso gene 1474 Tiso gene 11334 Tiso gene 10530 Tiso gene 18790 Tiso gene 8127 Tiso gene 13303 Tiso gene 8058 Tiso gene 12155 Tiso gene 7025 Tiso gene 5184 Tiso gene 16689 Tiso gene 865 Tiso gene 11822 Tiso gene 6214 Tiso gene 17660 Tiso gene 11013 Tiso gene 17661 Tiso gene 866 Tiso gene 4276 Tiso gene 17523 Tiso gene 11577 Tiso gene 4873 Tiso gene 3651
DNA-DIRECTED-RNA-POLYMERASE-RXN	EC-2.7.7.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 1036 Tiso gene 18581 Tiso gene 2991 Tiso gene 4620 Tiso gene 4065 Tiso gene 1037 Tiso gene 14025 Tiso gene 45 Tiso gene 15544 Tiso gene 4740 Tiso gene 3449 Tiso gene 12932 Tiso gene 6645 Tiso gene 13099 Tiso gene 12128 Tiso gene 16254 Tiso gene 20506 Tiso gene 11215 Tiso gene 12339 Tiso gene 3895 Tiso gene 7128 Tiso gene 44 Tiso gene 6812 Tiso gene 5176 Tiso gene 19914 Tiso gene 1013 Tiso gene 7315 Tiso gene 5178 Tiso gene 5177
DTDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 9290 Tiso gene 17271 Tiso gene 18224 Tiso gene 17272 Tiso gene 16529 Tiso gene 195	PWY-7210 PWY-7198 PWY-7184 PWY-7187 PWY-7197 PWY0-166 PWY-6545
DTMPKI-RXN	EC-2.7.4.12 EC-2.7.4.13 EC-2.7.4.9	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 3755	PWY-7210 PWY-7198 PWY-7184 PWY-7187 PWY-7197 PWY0-166 PWY-6545
DUDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 17271 Tiso gene 18224 Tiso gene 9290 Tiso gene 16529 Tiso gene 17272 Tiso gene 195	PWY-7184 PWY-6545 PWY0-166
DXPREDISOM-RXN	EC-1.1.1.267	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 15169	NONMEVIPP-PWY PWY-7560
DXS-RXN	EC-2.2.1.7	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17311	NONMEVIPP-PWY PWY-6891 PWY-6892 PYRIDOXSYN-PWY PWY-7560
F16ALDOLASE-RXN	EC-4.1.2.13	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Manual-primary network Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 14568 Tiso gene 9118 Tiso gene 9119 Tiso gene 9179 Tiso gene 12272 Tiso gene 65	PWY-1042 P341-PWY GLUCONEO-PWY GLYCOLYSIS SUCSYN-PWY PWY-7385 ANAGLYCOLYSIS-PWY CALVIN-PWY PWY-1861 PWY-6142 PWY-5484 P185-PWY PWY66-399
F16BDEPHOS-RXN	EC-3.1.3.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 4904 Tiso gene 3483 Tiso gene 4905 Tiso gene 15398 Tiso gene 9435 Tiso gene 8226 Tiso gene 16502	GLUCONEO-PWY SUCSYN-PWY GLYCOLYSIS CALVIN-PWY PWY-5484 P185-PWY PWY66-399
FARNESYLTRANSTRANSFERASE-RXN	EC-2.5.1.29	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 16284 Tiso gene 7305	PWY-7736 PWY-7492 PWY-6659 PWY-6691 PWY-5120 PWY-7720 PWY-7721 PWY-7517
FERREDOXIN--NITRITE-REDUCTASE-RXN	EC-1.7.7.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 7919	PWY-381 PWY490-3
FGAMSYN-RXN	EC-6.3.5.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-athaliana	Tiso gene 5865	PWY-6121 PWY-6122 PWY-6277
FORMATETHFLIG-RXN	EC-6.3.4.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7582 Tiso gene 432	PWY-2201 PWY-1722 PWY-2161 PWY-3841 CODH-PWY
FRUCTOKINASE-RXN	EC-2.7.1.4	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation	Tiso gene 17974 Tiso gene 1303 Tiso gene 3107	PWY-5384 PWY-621 SUCUTIL-PWY SUCROSEUTIL2-PWY PWY-4101 PWY-6531 PWY-3801 P122-PWY
FUMARATE-REDUCTASE-NADH-RXN	EC-1.3.1.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 7285 Tiso gene 16969 Tiso gene 16968 Tiso gene 19933
FUMHYDR-RXN	EC-4.2.1.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Manual-primary network Orthology-creinhardtii	Tiso gene 3691 Tiso gene 6720	PWY-561 PWY-5913 P42-PWY PWY-5690 PWY-7384 PWY-5392 P23-PWY P105-PWY FERMENTATION-PWY PWY-6728 REDCITCYC PWY-7254 P108-PWY TCA PWY66-398 PWY-6969
GALACTOKIN-RXN	EC-2.7.1.6	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus Annotation-experimental annotation	Tiso gene 11795 Tiso gene 10797 Tiso gene 5041 Tiso gene 5042 Tiso gene 12191	PWY-6317 PWY66-422 PWY-6527 PWY-3821
GALACTURIDYLYLTRANS-RXN	EC-2.7.7.12	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 2435	PWY-6317 PWY66-422 PWY-6527
GALPMUT-RXN	EC-5.4.99.9	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 3775 Tiso gene 15395	OANTIGEN-PWY PWY-6397 PWY-7328 PWY-7622
GAPDHSYNEC-RXN	EC-1.2.1.59	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 10646 Tiso gene 6765 Tiso gene 20000
GAPOXNPHOSPHN-RXN	EC-1.2.1.12	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 6766 Tiso gene 3344 Tiso gene 10646 Tiso gene 235 Tiso gene 20000	PWY-1042 PWY66-399 GLUCONEO-PWY SUCSYN-PWY PWY-6901 P124-PWY GLYCOLYSIS ANAGLYCOLYSIS-PWY PWY-5484 P185-PWY P122-PWY PWY-7003
GART-RXN	EC-2.1.2.2	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation		PWY-6121 PWY-6613
GCVT-RXN	EC-2.1.2.10	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 15700 Tiso gene 14788 Tiso gene 17287 Tiso gene 6882 Tiso gene 2717 Tiso gene 19389	GLYCLEAV-PWY
GDPKIN-RXN	EC-2.7.4.6	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17272 Tiso gene 17271 Tiso gene 18224 Tiso gene 195 Tiso gene 9290 Tiso gene 16529	PWY-7221 PPGPPMET-PWY
GDPMANDEHYDRA-RXN	EC-4.2.1.47	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 13093 Tiso gene 13092	GDPRHAMSYN-PWY PWY-7573 PWY-5740 PWY-66 PWY-5738 PWY-5739
GDPREDUCT-RXN	EC-1.17.4.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 9916 Tiso gene 10617 Tiso gene 9915 Tiso gene 10138	PWY-7222 PWY-7226
GLUC1PURIDYLTRANS-RXN	EC-2.7.7.64 EC-2.7.7.9	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 14796 Tiso gene 4816 Tiso gene 6457 Tiso gene 11401 Tiso gene 17531 Tiso gene 6458 Tiso gene 6459 Tiso gene 13477 Tiso gene 5879 Tiso gene 16930 Tiso gene 17566 Tiso gene 7102 Tiso gene 9110 Tiso gene 7440	PWY-7817 PWY-7343 PWY-6527 PWY-7238 PWY-3801
GLUCOKIN-RXN	EC-2.7.1.1 EC-2.7.1.2	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 1303 Tiso gene 3107	PWY-7238 TREDEGLOW-PWY PWY-621 PWY-7385 GLYCOCAT-PWY PWY0-1182 P124-PWY ANAGLYCOLYSIS-PWY GLUCOSE1PMETAB-PWY PWY-5514 PWY-2723 P122-PWY PWY-2722 PWY-5661
GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN	EC-5.1.3.15	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Orthology-creinhardtii Annotation-in-silico annotation	Tiso gene 14633 Tiso gene 15139 Tiso gene 19480 Tiso gene 17734
GLUCURONOKINASE-RXN	EC-2.7.1.43	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 12190	PWY-4841
GLURS-RXN	EC-6.1.1.17	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 5379 Tiso gene 5046	TRNA-CHARGING-PWY PWY-5188
GLUTAMATE-SYNTHASE-FERREDOXIN-RXN	EC-1.4.7.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 1773 Tiso gene 2581 Tiso gene 1154	PWY-6964 PWY-4341 PWY-6549
GLUTAMATESYN-RXN	EC-1.4.1.13	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 1154 Tiso gene 2581 Tiso gene 11511	GLUTAMINEFUM-PWY GLUTSYN-PWY
GLUTAMIN-RXN	EC-3.5.1.38 EC-3.5.1.2	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 17058 Tiso gene 17333 Tiso gene 19661 Tiso gene 4976 Tiso gene 4685 Tiso gene 4975 Tiso gene 2973 Tiso gene 11511 Tiso gene 1154 Tiso gene 3435 Tiso gene 3434 Tiso gene 1773 Tiso gene 6657 Tiso gene 7495 Tiso gene 2581	GLUTAMINDEG-PWY CITRULBIO-PWY
GLUTAMINE--TRNA-LIGASE-RXN	EC-6.1.1.18	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 11124 Tiso gene 7596 Tiso gene 5915	TRNA-CHARGING-PWY
GLUTAMINESYN-RXN	EC-6.3.1.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 13754 Tiso gene 13820 Tiso gene 6647 Tiso gene 14842	GLNSYN-PWY PWY-5675 PWY-381 PWY-6549 PWY-6964 PWY490-3 PWY-6963

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