Semantic search

	Common name	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
LEUCYLTRANSFERASE-RXN	ORF Leucyl phenylalanyl-trna--protein Leucyl phenylalanyl-trna--protein transferase	EC-2.3.2.6	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 13698 Tiso gene 2584 Tiso gene 8540	PWY-7801
LIGNOSTILBENE-ALPHA-BETA-DIOXYGENASE-RXN	9-cis-epoxycarotenoid neoxanthin cleavage enzyme-like protein	EC-1.13.11.43	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 7740
LINOLENOYL-RXN	Long chain acyl- synthetase Polyketide synthase Acyl- synthetase ORF	EC-6.2.1.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 9394 Tiso gene 4191 Tiso gene 348 Tiso gene 500 Tiso gene 136 Tiso gene 7855 Tiso gene 135 Tiso gene 13394 Tiso gene 10876	PWY-7049 PWY-7724
LIPIDADISACCHARIDESYNTH-RXN	ORF	EC-2.4.1.182	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 6736	NAGLIPASYN-PWY
LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN	Acyl-coenzyme a oxidase Acyl- dehydrogenase ORF Acyl-CoA dehydrogenase	EC-1.3.8.8	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 883 Tiso gene 16631 Tiso gene 5991 Tiso gene 18566 Tiso gene 6475 Tiso gene 17967
LYSINE--TRNA-LIGASE-RXN	Lysine--trna ligase	EC-6.1.1.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 16635 Tiso gene 6705	TRNA-CHARGING-PWY
LYSOPHOSPHOLIPASE-RXN	Lysophospholipase ORF	EC-3.1.1.5	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 12479 Tiso gene 19778 Tiso gene 12478 Tiso gene 15692 Tiso gene 8353 Tiso gene 334 Tiso gene 12375 Tiso gene 20565 Tiso gene 2505
MALATE-DEH-RXN	Malate dehydrogenase mitochondrial Malate dehydrogenation	EC-1.1.1.37	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 2323 Tiso gene 1990	FERMENTATION-PWY PWY-5913 PWY-561 MALATE-ASPARTATE-SHUTTLE-PWY PWY-1622 GLUCONEO-PWY P42-PWY PWY-5392 PWY-7383 TCA P23-PWY P105-PWY GLYOXYLATE-BYPASS PWY-6969 PWY-6728 PWY-7115 P108-PWY PWY-5690 PWY66-398 PWY66-399
MALONYL-COA-ACP-TRANSACYL-RXN	Polyketide synthase Malonyl- :acp transacylase	EC-2.3.1.86 EC-2.3.1.85 EC-2.3.1.39	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 135 Tiso gene 500 Tiso gene 10876 Tiso gene 13394 Tiso gene 19309 Tiso gene 136 Tiso gene 18460	PWY-6799 PWY-7388 PWY-4381
MALONYL-COA-DECARBOXYLASE-RXN	Lipoxygenase	EC-4.1.1.9	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 4463
MALSYN-RXN	Malate synthase g	EC-2.3.3.9	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 14377	PWY-7295 PWY-7294 GLYOXDEG-PWY P105-PWY GLYOXYLATE-BYPASS PWY-6969 PWY-6728 PWY-7118
MALTODEXGLUCOSID-RXN	Alpha-glucosidase	EC-3.2.1.20	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 600 Tiso gene 4953 Tiso gene 4952 Tiso gene 599
MANNITOL-1-PHOSPHATASE-RXN	Mannitol-1-phosphatase	EC-3.1.3.22	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 2123	PWY-3881 PWY-6531
MANNKIN-RXN	Hexokinase	EC-2.7.1.7	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-creinhardtii Annotation-experimental annotation	Tiso gene 3107 Tiso gene 1303	PWY-6140 PWY-3861 PWY-6992
MANNONDEHYDRAT-RXN	Mannonate dehydratase	EC-4.2.1.8	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 8331	PWY-7242
MANNURONATE-REDUCTASE-RXN	Carbonyl reductase	EC-1.1.1.131	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 20417
MEPROPCOA-FAD-RXN	Isobutyryl-CoA dehydrogenase	EC-1.3.8	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation		VALDEG-PWY
MERCAPYSTRANS-RXN	3-mercaptopyruvate sulfurtransferase	EC-2.8.1.2	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 5838	PWY-5329
MERCURY-II-REDUCTASE-RXN	Mercuric reductase	EC-1.16.1.1	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 3724	P641-PWY
METHIONINE--TRNA-LIGASE-RXN	Methionyl-trna synthetase	EC-6.1.1.10	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 406 Tiso gene 284	TRNA-CHARGING-PWY
METHIONYL-TRNA-FORMYLTRANSFERASE-RXN	Methionyl-trna formyltransferase Ribosomal rna small subunit methyltransferase	EC-2.1.2.9	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 13561 Tiso gene 13560 Tiso gene 9355
METHYLACYLYLCOA-HYDROXY-RXN	Methylacrylyl-CoA hydratase	EC-4.2.1.17	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 14257 Tiso gene 5857 Tiso gene 14262 Tiso gene 6885 Tiso gene 16145	VALDEG-PWY
METHYLCROTONYL-COA-CARBOXYLASE-RXN	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial Propionyl- carboxylase alpha chain	EC-6.4.1.4	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 10675 Tiso gene 5029 Tiso gene 14499	LEU-DEG2-PWY
METHYLENETHFDEHYDROG-NADP-RXN	ORF	EC-1.5.1.5	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 6004 Tiso gene 432	PWY-1722 PWY-3841 1CMET2-PWY CODH-PWY PWY-5497 PWY-2201
METHYLGLUTACONYL-COA-HYDRATASE-RXN		EC-4.2.1.18	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		LEU-DEG2-PWY PWY-7571
METHYLMALONYL-COA-MUT-RXN	Methylmalonyl- mitochondrial	EC-5.4.99.2	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 9771	PWY0-43 PWY-7384 PWY-5743 PWY-6728 PROPIONMET-PWY PWY-5789 P108-PWY
METHYLVALERATE-RXN	2-oxoisovalerate dehydrogenase alpha subunit mitochondrial	EC-1.2.4.4	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 3260 Tiso gene 18084
MEVALONATE-KINASE-RXN	Mevalonate kinase	EC-2.7.1.36	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 3811	PWY-922 PWY-6174 PWY-7391
MMUM-RXN	ORF	EC-2.1.1.10	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 5515	ADENOSYLHOMOCYSCAT-PWY PWY-702 PWY-5441
MONOPHENOL-MONOOXYGENASE-RXN	Tyrosinase	EC-1.14.18.1	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 1791	PWY-6481
MRNA-GUANINE-N7--METHYLTRANSFERASE-RXN	Mrna capguanine-n7methyltransferase Mrna cap guanine-n7 methyltransferase	EC-2.1.1.56	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 5135 Tiso gene 2105 Tiso gene 5134	PWY-7375
MRNA-GUANYLYLTRANSFERASE-RXN	Mrna capping enzyme alpha Snurportin-1	EC-2.7.7.50	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 2229 Tiso gene 7173 Tiso gene 7172	PWY-7375
MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN	Myo-inositol-1-phosphate synthase	EC-5.5.1.4	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7167	PWY-2301 PWY-4661 PWY-6580 PWY-6664 PWY1G-0 PWY-6372
MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN	Myo-inositol-1(or 4)-monophosphatase	EC-3.1.3.25	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Orthology-creinhardtii	Tiso gene 12601 Tiso gene 2527 Tiso gene 10754 Tiso gene 14713 Tiso gene 4855 Tiso gene 15599 Tiso gene 11614	PWY-2301
MYRISTOYLACYLTRAN-RXN	Lipid a biosynthesis acyltransferase	EC-2.3.1.243	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 14060 Tiso gene 5065	KDO-NAGLIPASYN-PWY KDO-LIPASYN-PWY
N-ACETYLGLUTPREDUCT-RXN	N-acetyl-gamma-glutamyl-phosphate reductase ORF	EC-1.2.1.38	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-experimental annotation Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 8102 Tiso gene 6700	PWY-5154 GLUTORN-PWY ARGSYNBSUB-PWY
N-ACETYLTRANSFER-RXN	N-acetylglutamate synthase	EC-2.3.1.1	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 5365 Tiso gene 11663	PWY-5154 GLUTORN-PWY ARGSYNBSUB-PWY
NAD+-ADP-RIBOSYLTRANSFERASE-RXN	Formin-d-like ORF Nod3 protein Tccd-inducible-parp-like domain-containing protein	EC-2.4.2.30	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 451 Tiso gene 450 Tiso gene 9412 Tiso gene 14353 Tiso gene 12351 Tiso gene 17992 Tiso gene 342 Tiso gene 11399 Tiso gene 10079 Tiso gene 4831 Tiso gene 16863 Tiso gene 5199 Tiso gene 12350 Tiso gene 10080 Tiso gene 18366 Tiso gene 9411 Tiso gene 4453 Tiso gene 10122 Tiso gene 4452 Tiso gene 3487 Tiso gene 13134 Tiso gene 3971 Tiso gene 12360 Tiso gene 671 Tiso gene 848 Tiso gene 2309 Tiso gene 16302 Tiso gene 9065
NAD-KIN-RXN	Diacylglycerol kinase catalytic region Diacylglycerol kinase Sphingosine kinase 1	EC-2.7.1.23	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 14560 Tiso gene 1163 Tiso gene 1420	PWY-5083 NADPHOS-DEPHOS-PWY-1 PWY-7268 PWY-7269 NADPHOS-DEPHOS-PWY
NADH-DEHYDROG-A-RXN	Nadh dehydrogenase ORF Nadh-ubiquinone oxidoreductase chain 4 Protein mida Upf0753 proteinmysti 00687 Nadh dehydrogenase 1 alpha subcomplex Nadh dehydrogenase iron-sulfur protein 4 Upf0753 protein plabr 3227	EC-1.6.5.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 18172 Tiso gene 17199 Tiso gene 10326 Tiso gene 4894 Tiso gene 2949 Tiso gene 13075 Tiso gene 358 Tiso gene 15276 Tiso gene 4836 Tiso gene 359 Tiso gene 18339 Tiso gene 5171 Tiso gene 19691 Tiso gene 9874 Tiso gene 18707 Tiso gene 18831 Tiso gene 3113 Tiso gene 355	PWY-6692 PWY-3781 PWY-5083 PWY0-1335 PWY0-1334 PWY-4302
NADH-DEHYDROGENASE-RXN	Selenophosphate synthetase	EC-1.6.99.3	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 5668 Tiso gene 5669
NADPH-DEHYDROGENASE-FLAVIN-RXN	ORF Phosphatidylinositide phosphatase sac1like protein	EC-1.5.1.30	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 17237 Tiso gene 10165 Tiso gene 11879 Tiso gene 11561
NAG1P-URIDYLTRANS-RXN	Dp-n-acetylglucosamine pyrophosphorylase	EC-2.7.7.23	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation	Tiso gene 6457 Tiso gene 19372 Tiso gene 6459 Tiso gene 6458	UDPNACETYLGALSYN-PWY PWY-5514 PWY0-1261 UDPNAGSYN-PWY
NICONUCADENYLYLTRAN-RXN	Probable nicotinate-nucleotide adenylyltransferase	EC-2.7.7.18	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 6231	PWY-5381 PWY-5653 PYRIDNUCSYN-PWY PWY-7761 PYRIDNUCSAL-PWY
NICOTINAMIDE-N-METHYLTRANSFERASE-RXN	ORF	EC-2.1.1.1	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 8878
NITRATE-REDUCTASE-NADH-RXN	Assimilatory nitrate reductase ORF	EC-1.7.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 16889 Tiso gene 18918	PWY-381
NITRILE-HYDRATASE-RXN	Probable nitrile hydratase	EC-4.2.1.84	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 4032
NQOR-RXN	Possible vitamin k epoxide plastid protein	EC-1.6.5.2	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 10318
NUCLEOSIDE-DIP-KIN-RXN	ORF Adenylate kinase domain-containing protein 1 Nucleoside diphosphate kinase	EC-2.7.4.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 17271 Tiso gene 18224 Tiso gene 17272 Tiso gene 195 Tiso gene 9290 Tiso gene 16529
NUCLEOSIDE-DIPHOSPHATASE-RXN	ORF	EC-3.6.1.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 20236 Tiso gene 13653 Tiso gene 12899

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