Semantic search

	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
NUCLEOSIDE-PHOSPHATE-KINASE-RXN	EC-2.7.4.4	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 195
NUCLEOSIDE-TRIPHOSPHATASE-RXN	EC-3.6.1.15	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 5529 Tiso gene 9959 Tiso gene 8860 Tiso gene 195 Tiso gene 4330 Tiso gene 2452 Tiso gene 12148 Tiso gene 538 Tiso gene 2631 Tiso gene 13264 Tiso gene 13681 Tiso gene 250 Tiso gene 1610 Tiso gene 572 Tiso gene 8461 Tiso gene 12899 Tiso gene 9926 Tiso gene 2068 Tiso gene 6614 Tiso gene 20327 Tiso gene 8601 Tiso gene 9423 Tiso gene 1611 Tiso gene 7123 Tiso gene 13325 Tiso gene 20353 Tiso gene 199 Tiso gene 4192 Tiso gene 4194 Tiso gene 20236 Tiso gene 4155 Tiso gene 8950 Tiso gene 5166 Tiso gene 8763 Tiso gene 1984 Tiso gene 2889 Tiso gene 4596 Tiso gene 11098 Tiso gene 16478 Tiso gene 546 Tiso gene 2176 Tiso gene 8584 Tiso gene 8164 Tiso gene 19098 Tiso gene 674 Tiso gene 19350 Tiso gene 17449 Tiso gene 13653 Tiso gene 2924 Tiso gene 7387 Tiso gene 9243 Tiso gene 2449 Tiso gene 1444 Tiso gene 4026 Tiso gene 10221 Tiso gene 14227 Tiso gene 5525 Tiso gene 1541 Tiso gene 9234 Tiso gene 6180 Tiso gene 15465 Tiso gene 4726 Tiso gene 14239 Tiso gene 8859 Tiso gene 17751 Tiso gene 3653 Tiso gene 14646 Tiso gene 9114 Tiso gene 4092 Tiso gene 1959 Tiso gene 4437 Tiso gene 623 Tiso gene 13738 Tiso gene 3287 Tiso gene 10282 Tiso gene 829 Tiso gene 14226 Tiso gene 1291 Tiso gene 14816 Tiso gene 9004 Tiso gene 13268 Tiso gene 1960 Tiso gene 38 Tiso gene 2451 Tiso gene 2450 Tiso gene 537 Tiso gene 17616 Tiso gene 11012 Tiso gene 2448 Tiso gene 873 Tiso gene 2447 Tiso gene 4436 Tiso gene 9659 Tiso gene 2897 Tiso gene 7745 Tiso gene 8949 Tiso gene 12149 Tiso gene 2929 Tiso gene 6181 Tiso gene 15043 Tiso gene 14474 Tiso gene 7734
NUCLEOTIDE-PYROPHOSPHATASE-RXN	EC-3.6.1.9	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 18793 Tiso gene 18792
OHACYL-COA-DEHYDROG-RXN	EC-1.1.1.35	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 14027 Tiso gene 14026 Tiso gene 18839 Tiso gene 18838 Tiso gene 5857 Tiso gene 14262	PWY-5136 PWY-7007 FAO-PWY PWY66-391
OHMETHYLBILANESYN-RXN	EC-2.5.1.61	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14709 Tiso gene 11630	PWY-5189 PWY-5188
ORNCARBAMTRANSFER-RXN	EC-2.1.3.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 18444	ARGSYN-PWY PWY-4984 ARGSYNBSUB-PWY PWY-4981 PWY-7400 CITRULLINE-DEG-PWY CITRULBIO-PWY
ORNITHINE-CYCLODEAMINASE-RXN	EC-4.3.1.12	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 17134 Tiso gene 1843	ORN-AMINOPENTANOATE-CAT-PWY ARG-GLU-PWY
OROPRIBTRANS-RXN	EC-2.4.2.10	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-synechocystis	Tiso gene 11163 Tiso gene 11164 Tiso gene 18647	PWY-7790 PWY-7791 PWY-5686
OROTPDECARB-RXN	EC-4.1.1.23	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 20050 Tiso gene 18647	PWY-7790 PWY-7791 PWY-5686
PABASYN-RXN	EC-2.6.1.85	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 13939 Tiso gene 11176	PWY-6543
PALMITOYL-COA-HYDROLASE-RXN	EC-3.1.2.2	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-creinhardtii	Tiso gene 801	PWY-321 PWY-1121 PWY-6733 PWY-5994
PANTOATE-BETA-ALANINE-LIG-RXN	EC-6.3.2.1	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation	Tiso gene 14466 Tiso gene 14465	PANTO-PWY
PANTOTHENATE-KIN-RXN	EC-2.7.1.33	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 4468 Tiso gene 4467	PANTO-PWY PWY-3961 COA-PWY-1
PEPCARBOXYKIN-RXN	EC-4.1.1.49	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Orthology-creinhardtii Orthology-athaliana Orthology-esiliculosus	Tiso gene 19475	PWY-561 PWY-7117 GLUCONEO-PWY
PEPDEPHOS-RXN	EC-2.7.1.40	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 974 Tiso gene 18206 Tiso gene 14505 Tiso gene 14504	PWY-1042 P341-PWY PWY-2221 GLYCOLYSIS PWY-6901 ANAGLYCOLYSIS-PWY P124-PWY NPGLUCAT-PWY PWY-7383 PWY-6886 PWY-5723 FERMENTATION-PWY PWY-7218 PWY-6142 P122-PWY PWY-5484 PWY-7003
PEPSYNTH-RXN	EC-2.7.9.2	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		P23-PWY PWY-5484 GLUCONEO-PWY GLYCOLYSIS
PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN	EC-1.14.11.16	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 10501 Tiso gene 7631 Tiso gene 16225 Tiso gene 19054 Tiso gene 17313 Tiso gene 19156 Tiso gene 7632 Tiso gene 17769
PEPTIDYLGLYCINE-MONOOXYGENASE-RXN	EC-1.14.17.3	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 3609
PEPTIDYLPROLYL-ISOMERASE-RXN	EC-5.2.1.8	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 7717 Tiso gene 19642 Tiso gene 5023 Tiso gene 10268 Tiso gene 14583 Tiso gene 8905 Tiso gene 857 Tiso gene 17352 Tiso gene 19432 Tiso gene 1404 Tiso gene 19998 Tiso gene 19799 Tiso gene 8435 Tiso gene 14086 Tiso gene 7718 Tiso gene 4273 Tiso gene 3109 Tiso gene 10233 Tiso gene 18320 Tiso gene 14085 Tiso gene 12758 Tiso gene 18421 Tiso gene 20316 Tiso gene 4395 Tiso gene 10560 Tiso gene 7896 Tiso gene 9976 Tiso gene 15138 Tiso gene 13872 Tiso gene 8436 Tiso gene 10084 Tiso gene 303 Tiso gene 8434 Tiso gene 8110 Tiso gene 15858 Tiso gene 3939 Tiso gene 2192 Tiso gene 17027 Tiso gene 565 Tiso gene 15481 Tiso gene 11070 Tiso gene 15556 Tiso gene 13636 Tiso gene 8433 Tiso gene 856 Tiso gene 2166 Tiso gene 13541 Tiso gene 19919 Tiso gene 15137 Tiso gene 9105 Tiso gene 17484 Tiso gene 2245 Tiso gene 18321 Tiso gene 10399 Tiso gene 19431 Tiso gene 8283 Tiso gene 5207 Tiso gene 18283 Tiso gene 6211 Tiso gene 8055 Tiso gene 9648 Tiso gene 18813 Tiso gene 18908 Tiso gene 11831 Tiso gene 14322 Tiso gene 7851 Tiso gene 8543 Tiso gene 13794 Tiso gene 8216 Tiso gene 18505 Tiso gene 17230 Tiso gene 5063 Tiso gene 9591 Tiso gene 9733 Tiso gene 6629 Tiso gene 14567 Tiso gene 3172 Tiso gene 14514 Tiso gene 15555 Tiso gene 4076 Tiso gene 19952 Tiso gene 3721 Tiso gene 11786 Tiso gene 17206 Tiso gene 11832 Tiso gene 17722 Tiso gene 11161 Tiso gene 66 Tiso gene 19510 Tiso gene 9531 Tiso gene 20539 Tiso gene 5934 Tiso gene 18879 Tiso gene 9975 Tiso gene 7386 Tiso gene 8432 Tiso gene 5022 Tiso gene 3171 Tiso gene 11932
PEROXID-RXN	EC-1.11.1.7	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 20206 Tiso gene 6431 Tiso gene 7067 Tiso gene 15962 Tiso gene 5857 Tiso gene 15820 Tiso gene 9359 Tiso gene 19683 Tiso gene 11016 Tiso gene 17551 Tiso gene 16028
PGLUCISOM-RXN	EC-5.3.1.9	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 19480	RUMP-PWY GLYCOLYSIS PWY-3801 PWY-7385 P124-PWY ANAGLYCOLYSIS-PWY PWY-5659 PWY-6981 P341-PWY PWY-5384 PWY-7347 PWY66-399 SUCSYN-PWY UDPNAGSYN-PWY PWY-621 PWY-622 PWY-5054 PWY-6992 PWY-6142 GLUCONEO-PWY PWY-7238 PWY-5514 P122-PWY
PGLYCDEHYDROG-RXN	EC-1.1.1.95	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 18904 Tiso gene 17123 Tiso gene 15686 Tiso gene 6223 Tiso gene 6224 Tiso gene 15687	SERSYN-PWY
PGPPHOSPHA-RXN	EC-3.1.3.27	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 18092	PWY4FS-7 PWY4FS-8 PWY-5269 PWY-7817 PWY-5668 PWY0-1545
PHENDEHYD-RXN	EC-1.2.1.39	Annotation	Pathwaytools	Annotation-in-silico annotation		PWY-6941 ANAPHENOXI-PWY PWY-6534 2PHENDEG-PWY PWY-6318
PHENYLALANINE--TRNA-LIGASE-RXN	EC-6.1.1.20	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 1625 Tiso gene 4232 Tiso gene 16650 Tiso gene 16467	TRNA-CHARGING-PWY
PHENYLPYRUVATE-TAUTOMERASE-RXN	EC-5.3.2.1	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation
PHOSACETYLGLUCOSAMINEMUT-RXN	EC-5.4.2.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 13231 Tiso gene 13230	PWY-6906 PWY-5514 UDPNACETYLGALSYN-PWY
PHOSGLYPHOS-RXN	EC-2.7.2.3	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 14642 Tiso gene 3527 Tiso gene 18264 Tiso gene 3526 Tiso gene 18263 Tiso gene 12104	PWY-1042 PWY-7003 GLUCONEO-PWY GLYCOLYSIS PWY-6901 SUCSYN-PWY P124-PWY PWY-6886 CALVIN-PWY ANAGLYCOLYSIS-PWY P122-PWY P185-PWY PWY-5484 PWY66-399
PHOSMANMUT-RXN	EC-5.4.2.8	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Orthology-creinhardtii	Tiso gene 13477 Tiso gene 4816 Tiso gene 14704 Tiso gene 5802	PWY-7456 PWY-5659 PWY-882 PWY-7586
PHOSNACMURPENTATRANS-RXN	EC-2.7.8.13	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 1604	PEPTIDOGLYCANSYN-PWY
PHOSPHAGLYPSYN-RXN	EC-2.7.8.5	Annotation	Pathwaytools	Annotation-in-silico annotation		PWY4FS-7 PWY4FS-8 PWY-5269 PWY-7817 PWY-5668 PWY0-1545
PHOSPHASERDECARB-RXN	EC-4.1.1.65	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 16021	PWY-5669
PHOSPHATIDATE-PHOSPHATASE-RXN	EC-3.1.3.4	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 5063 Tiso gene 7386	TRIGLSYN-PWY
PHOSPHOGLUCMUT-RXN	EC-5.4.2.2	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 13477 Tiso gene 4816	PWY-7238 PWY-5384 GLYCOCAT-PWY PWY-7343 PWY-3801 PWY-622 PWY-6731 GLUCOSE1PMETAB-PWY PWY-6737 PWY-6317 PWY-2723 PWY66-422 PWY-5940 GLYCOGENSYNTH-PWY PWY-5941 PWY-5661
PHOSPHOLIPASE-A2-RXN	EC-3.1.1.4	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 15046 Tiso gene 15047 Tiso gene 12960 Tiso gene 12959	PWY-6803 LIPASYN-PWY
PHOSPHORIBULOKINASE-RXN	EC-2.7.1.19	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17637	CALVIN-PWY PWY-5723
PMPOXI-RXN	EC-1.4.3.5	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 1471	PWY-7204 PLPSAL-PWY
PNKIN-RXN	EC-2.7.1.35	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 6106	PWY-7204 PWY-7282 PLPSAL-PWY
PNPOXI-RXN	EC-1.4.3.5	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 1471	PWY-7204 PWY-7282 PLPSAL-PWY PYRIDOXSYN-PWY
POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN	EC-2.7.7.19	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 11334
PORPHOBILSYNTH-RXN	EC-4.2.1.24	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13382	PWY-5189 PWY-5188
PPGPPSYN-RXN	EC-3.1.7.2	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 6799	PPGPPMET-PWY
PREPHENATEDEHYDRAT-RXN	EC-4.2.1.51	Orthology Manual Annotation	Pantograph Pathwaytools	Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 5940 Tiso gene 6815	PWY-7432 PHESYN
PRIBFAICARPISOM-RXN	EC-5.3.1.16	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 11199 Tiso gene 1565	HISTSYN-PWY
PRODISULFREDUCT-A-RXN	EC-1.8.4	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		GLUT-REDOX-PWY
PROGESTERONE-5-ALPHA-REDUCTASE-RXN	EC-1.3.1.22	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 14327	PWY-6032 PWY-7455
PROLINE--TRNA-LIGASE-RXN	EC-6.1.1.15	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 11974 Tiso gene 14791	TRNA-CHARGING-PWY
PROLINE-RACEMASE-RXN	EC-5.1.1.4	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 13061	PWY-6344
PROTEIN-ARGININE-DEIMINASE-RXN	EC-3.5.3.15	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 16344 Tiso gene 19262	PWY-4921
PROTEIN-KINASE-RXN	EC-2.7.11.21 EC-2.7.11.22 EC-2.7.11.13 EC-2.7.11.1 EC-2.7.11.17 EC-2.7.11.12	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 19455 Tiso gene 3991 Tiso gene 13244 Tiso gene 5970 Tiso gene 13509 Tiso gene 5164 Tiso gene 6216 Tiso gene 8616 Tiso gene 1492 Tiso gene 16376 Tiso gene 10356 Tiso gene 13434 Tiso gene 8016 Tiso gene 11071 Tiso gene 8480 Tiso gene 13974 Tiso gene 18561 Tiso gene 15059 Tiso gene 4902 Tiso gene 8413 Tiso gene 17047 Tiso gene 5596 Tiso gene 15848 Tiso gene 12828 Tiso gene 3977 Tiso gene 3733 Tiso gene 3326 Tiso gene 3762 Tiso gene 775 Tiso gene 10543 Tiso gene 12692 Tiso gene 8492 Tiso gene 9776 Tiso gene 14508 Tiso gene 9846 Tiso gene 5765 Tiso gene 8328 Tiso gene 7634 Tiso gene 17022 Tiso gene 9582 Tiso gene 11397 Tiso gene 18523 Tiso gene 17050 Tiso gene 17530 Tiso gene 4479 Tiso gene 20347 Tiso gene 2253 Tiso gene 9607 Tiso gene 16678 Tiso gene 7814 Tiso gene 5584 Tiso gene 2393 Tiso gene 2607 Tiso gene 12544 Tiso gene 10315 Tiso gene 19611 Tiso gene 4028 Tiso gene 169 Tiso gene 18221 Tiso gene 14941 Tiso gene 12236 Tiso gene 10542 Tiso gene 7843 Tiso gene 8701 Tiso gene 6071 Tiso gene 2262 Tiso gene 808 Tiso gene 3818 Tiso gene 17980 Tiso gene 19151 Tiso gene 7813 Tiso gene 6208 Tiso gene 3992 Tiso gene 18334 Tiso gene 8561 Tiso gene 12827 Tiso gene 11990 Tiso gene 17940 Tiso gene 11594 Tiso gene 6091 Tiso gene 14030 Tiso gene 14940 Tiso gene 12183 Tiso gene 15483 Tiso gene 9522 Tiso gene 7049 Tiso gene 11962 Tiso gene 13588 Tiso gene 14982 Tiso gene 4265 Tiso gene 1450 Tiso gene 307 Tiso gene 15652 Tiso gene 9800 Tiso gene 7932 Tiso gene 10355 Tiso gene 17535

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