RXN-9535
From metabolic_network
Revision as of 19:32, 21 March 2018 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
Contents
Reaction RXN-9535
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
- β-ketoacyl-ACP synthase I
- β-ketoacyl-acyl carrier protein synthetase
- β-ketoacyl-[acyl carrier protein] synthase
- condensing enzyme
- β-ketoacyl acyl carrier protein synthase
- 3-oxoacyl-[acyl-carrier-protein] synthase
- acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
Reaction Formula
- With identifiers:
- 1 MALONYL-ACP[c] + 1 Dodecanoyl-ACPs[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 3-oxo-myristoyl-ACPs[c] + 1 ACP[c]
- With common name(s):
- 1 a malonyl-[acp][c] + 1 a dodecanoyl-[acp][c] + 1 H+[c] => 1 CO2[c] + 1 a 3-oxo-myristoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_500
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_13394
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_15991
- Source: orthology-athaliana
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Gene: Tiso_gene_14485
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Gene: Tiso_gene_135
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19302
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Gene: Tiso_gene_10876
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5939
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_136
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
- 31 reactions found over 31 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
- "β-ketoacyl-[acyl carrier protein] synthase" cannot be used as a page name in this wiki.
- "3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.
- "acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" cannot be used as a page name in this wiki.
