Difference between revisions of "1-6-alpha-D-glucan"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2062 TAX-20...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] == * direction: ** REVERSIBL...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2062 TAX-2062]
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** REVERSIBLE
 
* common name:
 
* common name:
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** dTDP-L-daunosamine biosynthesis
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** branched-chain_amino_acid_aminotransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''2''' reaction(s) found
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* With identifiers:
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** [[DTDPGLUCDEHYDRAT-RXN]]
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** 1 [[VAL]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[GLT]][c]
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** [[DTDPGLUCOSEPP-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 L-valine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 L-glutamate[c]
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* '''4''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18003 RXN-18003]
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYDRHAMEPIM-RXN DTDPDEHYDRHAMEPIM-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18005 RXN-18005]
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* [[Tiso_gene_18403]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-18004 RXN-18004]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_14984]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[ALANINE-VALINESYN-PWY]], L-alanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[manual]]:
 +
** [[primary_network]]
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* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2062}}
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* RHEA:
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{{#set: common name=dTDP-L-daunosamine biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24813 24813]
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{{#set: reaction found=2}}
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* LIGAND-RXN:
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{{#set: reaction not found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01214 R01214]
 +
* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=branched-chain_amino_acid_aminotransferase}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: gene associated=Tiso_gene_18403|Tiso_gene_14984}}
 +
{{#set: in pathway=VALSYN-PWY|VALDEG-PWY|ALANINE-VALINESYN-PWY|PWY-5057}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:32, 10 January 2018

Reaction BRANCHED-CHAINAMINOTRANSFERVAL-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain_amino_acid_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-valine[c] + 1 2-oxoglutarate[c] <=> 1 3-methyl-2-oxobutanoate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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