Difference between revisions of "1.14.13.8-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYRISTOYLACYLTRAN-RXN MYRISTOYLACYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** lip...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.8-RXN 1.14.13.8-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** fad-containi...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYRISTOYLACYLTRAN-RXN MYRISTOYLACYLTRAN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.8-RXN 1.14.13.8-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** lipid_a_biosynthesis_acyltransferase
+
** ORF
 +
** fad-containing_monooxygenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.243 EC-2.3.1.243]
+
** [http://enzyme.expasy.org/EC/1.14.13.8 EC-1.14.13.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[KDO2-LAUROYL-LIPID-IVA]][c] '''=>''' 1 [[KDO2-LIPID-A]][c] '''+''' 1 [[ACP]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NN-DIMETHYLANILINE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[NN-DIMETHYLANILINE-N-OXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a myristoyl-[acp][c] '''+''' 1 α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA[c] '''=>''' 1 α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A[c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
** 1 NADPH[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''+''' 1 N,N-dimethylaniline[c] '''=>''' 1 H2O[c] '''+''' 1 NADP+[c] '''+''' 1 N,N-dimethylaniline-N-oxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_5065]]
+
* Gene: [[Tiso_gene_9139]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9613]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_14060]]
+
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10094]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[KDO-NAGLIPASYN-PWY]], superpathway of (Kdo)2-lipid A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=KDO-NAGLIPASYN-PWY KDO-NAGLIPASYN-PWY]
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
−
* [[KDO-LIPASYN-PWY]], (Kdo)2-lipid A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPASYN-PWY KDO-LIPASYN-PWY]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
Line 34: Line 40:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28438 28438]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24468 24468]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05075 R05075]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03344 R03344]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16549 P16549]
 +
** [http://www.uniprot.org/uniprot/P17636 P17636]
 +
** [http://www.uniprot.org/uniprot/Q01740 Q01740]
 +
** [http://www.uniprot.org/uniprot/Q04799 Q04799]
 +
** [http://www.uniprot.org/uniprot/Q7M061 Q7M061]
 +
** [http://www.uniprot.org/uniprot/P17635 P17635]
 +
** [http://www.uniprot.org/uniprot/P49328 P49328]
 +
** [http://www.uniprot.org/uniprot/P32417 P32417]
 +
** [http://www.uniprot.org/uniprot/P31512 P31512]
 +
** [http://www.uniprot.org/uniprot/Q7M2Q0 Q7M2Q0]
 +
** [http://www.uniprot.org/uniprot/P31513 P31513]
 +
** [http://www.uniprot.org/uniprot/P49109 P49109]
 +
** [http://www.uniprot.org/uniprot/P49326 P49326]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lipid_a_biosynthesis_acyltransferase}}
+
{{#set: common name=ORF}}
−
{{#set: ec number=EC-2.3.1.243}}
+
{{#set: common name=fad-containing_monooxygenase}}
−
{{#set: gene associated=Tiso_gene_5065|Tiso_gene_14060}}
+
{{#set: ec number=EC-1.14.13.8}}
−
{{#set: in pathway=KDO-NAGLIPASYN-PWY|KDO-LIPASYN-PWY}}
+
{{#set: gene associated=Tiso_gene_9139|Tiso_gene_9613|Tiso_gene_4|Tiso_gene_10094}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:01, 21 March 2018

Reaction 1.14.13.8-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • fad-containing_monooxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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