Difference between revisions of "1.2.1.13-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glyceraldehyde-3-phos...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58023 TAX-58023]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** rosmarinic acid biosynthesis I
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** glyceraldehyde-3-phosphate_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1.13 EC-1.2.1.13]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[DPG]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[NADP]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_17718]]
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** 1 H+[c] '''+''' 1 1,3-bisphospho-D-glycerate[c] '''+''' 1 NADPH[c] '''=>''' 1 phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 NADP+[c]
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*** [[Tiso_gene_10680]]
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*** [[Tiso_gene_6815]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[manual-primary_network]]
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* Gene: [[Tiso_gene_6766]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_6765]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.222-RXN 1.1.1.222-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7626 RXN-7626]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7628 RXN-7628]
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** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7629 RXN-7629]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7630 RXN-7630]
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* Gene: [[Tiso_gene_20000]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7631 RXN-7631]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10646]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-58023}}
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* RHEA:
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{{#set: common name=rosmarinic acid biosynthesis I}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10296 10296]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: total reaction=7}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01063 R01063]
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{{#set: completion rate=14.0}}
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* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P09672 P09672]
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** [http://www.uniprot.org/uniprot/P09094 P09094]
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** [http://www.uniprot.org/uniprot/P12858 P12858]
 +
** [http://www.uniprot.org/uniprot/P12859 P12859]
 +
** [http://www.uniprot.org/uniprot/P12860 P12860]
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** [http://www.uniprot.org/uniprot/P09315 P09315]
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** [http://www.uniprot.org/uniprot/P25856 P25856]
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** [http://www.uniprot.org/uniprot/Q7M1R8 Q7M1R8]
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** [http://www.uniprot.org/uniprot/Q7M1R7 Q7M1R7]
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** [http://www.uniprot.org/uniprot/Q37174 Q37174]
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** [http://www.uniprot.org/uniprot/P30724 P30724]
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** [http://www.uniprot.org/uniprot/P80505 P80505]
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** [http://www.uniprot.org/uniprot/Q55245 Q55245]
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** [http://www.uniprot.org/uniprot/O22534 O22534]
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** [http://www.uniprot.org/uniprot/P50362 P50362]
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** [http://www.uniprot.org/uniprot/P19866 P19866]
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** [http://www.uniprot.org/uniprot/Q41019 Q41019]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glyceraldehyde-3-phosphate_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.13}}
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{{#set: gene associated=Tiso_gene_6766|Tiso_gene_6765|Tiso_gene_20000|Tiso_gene_10646}}
 +
{{#set: in pathway=CALVIN-PWY}}
 +
{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:04, 21 March 2018

Reaction 1.2.1.13-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glyceraldehyde-3-phosphate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 1,3-bisphospho-D-glycerate[c] + 1 NADPH[c] => 1 phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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