Difference between revisions of "1.2.1.13-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_8473 == * right end position: ** 3163 * transcription direction: ** POSITIVE * left end position: ** 628 * centisome position: ** 6.1604867...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glyceraldehyde-3-phos...")
 
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_8473 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN] ==
* right end position:
+
* direction:
** 3163
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** glyceraldehyde-3-phosphate_dehydrogenase
* left end position:
+
* ec number:
** 628
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** [http://enzyme.expasy.org/EC/1.2.1.13 EC-1.2.1.13]
* centisome position:
+
** 6.1604867   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[STRICTOSIDINE-SYNTHASE-RXN]]
+
* With identifiers:
 +
** 1 [[PROTON]][c] '''+''' 1 [[DPG]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[NADP]][c]
 +
* With common name(s):
 +
** 1 H+[c] '''+''' 1 1,3-bisphospho-D-glycerate[c] '''+''' 1 NADPH[c] '''=>''' 1 phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 NADP+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6766]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6765]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_20000]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10646]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
== Pathways associated ==
+
** Source: [[annotation-experimental_annotation]]
* [[PWY-5290]]
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*** Tool: [[pathwaytools]]
* [[PWY-6326]]
+
 
== External links  ==
 
== External links  ==
{{#set: right end position=3163}}
+
* RHEA:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10296 10296]
{{#set: left end position=628}}
+
* LIGAND-RXN:
{{#set: centisome position=6.1604867    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01063 R01063]
{{#set: reaction associated=STRICTOSIDINE-SYNTHASE-RXN}}
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* UNIPROT:
{{#set: pathway associated=PWY-5290|PWY-6326}}
+
** [http://www.uniprot.org/uniprot/P09672 P09672]
 +
** [http://www.uniprot.org/uniprot/P09094 P09094]
 +
** [http://www.uniprot.org/uniprot/P12858 P12858]
 +
** [http://www.uniprot.org/uniprot/P12859 P12859]
 +
** [http://www.uniprot.org/uniprot/P12860 P12860]
 +
** [http://www.uniprot.org/uniprot/P09315 P09315]
 +
** [http://www.uniprot.org/uniprot/P25856 P25856]
 +
** [http://www.uniprot.org/uniprot/Q7M1R8 Q7M1R8]
 +
** [http://www.uniprot.org/uniprot/Q7M1R7 Q7M1R7]
 +
** [http://www.uniprot.org/uniprot/Q37174 Q37174]
 +
** [http://www.uniprot.org/uniprot/P30724 P30724]
 +
** [http://www.uniprot.org/uniprot/P80505 P80505]
 +
** [http://www.uniprot.org/uniprot/Q55245 Q55245]
 +
** [http://www.uniprot.org/uniprot/O22534 O22534]
 +
** [http://www.uniprot.org/uniprot/P50362 P50362]
 +
** [http://www.uniprot.org/uniprot/P19866 P19866]
 +
** [http://www.uniprot.org/uniprot/Q41019 Q41019]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glyceraldehyde-3-phosphate_dehydrogenase}}
 +
{{#set: ec number=EC-1.2.1.13}}
 +
{{#set: gene associated=Tiso_gene_6766|Tiso_gene_6765|Tiso_gene_20000|Tiso_gene_10646}}
 +
{{#set: in pathway=CALVIN-PWY}}
 +
{{#set: reconstruction category=manual|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:04, 21 March 2018

Reaction 1.2.1.13-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glyceraldehyde-3-phosphate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 1,3-bisphospho-D-glycerate[c] + 1 NADPH[c] => 1 phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links