Difference between revisions of "1.2.1.25-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_17207 == * left end position: ** 959 * transcription direction: ** POSITIVE * right end position: ** 2595 * centisome position: ** 24.89615...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-2-oxobutanoa...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_17207 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] ==
−
* left end position:
+
* direction:
−
** 959
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** 3-methyl-2-oxobutanoate_dehydrogenase
−
* right end position:
+
* ec number:
−
** 2595
+
** [http://enzyme.expasy.org/EC/1.2.1.25 EC-1.2.1.25]
−
* centisome position:
+
−
** 24.896158   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[5.1.1.16-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 [[CO-A]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ISOBUTYRYL-COA]][c]
−
* [[5.1.1.18-RXN]]
+
* With common name(s):
−
** [[pantograph]]-[[creinhardtii]]
+
** 1 coenzyme A[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 isobutanoyl-CoA[c]
−
* [[RXN-15122]]
+
 
−
** in-silico_annotation
+
== Genes associated with this reaction  ==
−
***ec-number
+
Genes have been associated with this reaction based on different elements listed below.
−
** experimental_annotation
+
* Gene: [[Tiso_gene_3260]]
−
***ec-number
+
** Source: [[annotation-experimental_annotation]]
−
* [[RXN0-2381]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_11793]]
−
* [[RXN0-2382]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[THREDEHYD-RXN]]
+
== Pathways ==
−
** in-silico_annotation
+
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
−
***ec-number
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** experimental_annotation
+
== Reconstruction information  ==
−
***ec-number
+
* Category: [[annotation]]
−
* [[TRYPSYN-RXN]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [[ILEUSYN-PWY]]
+
*** Tool: [[pathwaytools]]
−
* [[PWY-5437]]
+
−
* [[PWY-6196]]
+
−
* [[PWY66-428]]
+
−
* [[PWY-5826]]
+
−
* [[TRPSYN-PWY]]
+
−
* [[PWY-6455]]
+
−
* [[PWY-6949]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=959}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13997 13997]
−
{{#set: right end position=2595}}
+
* LIGAND-RXN:
−
{{#set: centisome position=24.896158    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01210 R01210]
−
{{#set: reaction associated=5.1.1.16-RXN|5.1.1.18-RXN|RXN-15122|RXN0-2381|RXN0-2382|THREDEHYD-RXN|TRYPSYN-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=ILEUSYN-PWY|PWY-5437|PWY-6196|PWY66-428|PWY-5826|TRPSYN-PWY|PWY-6455|PWY-6949}}
+
{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
 +
{{#set: ec number=EC-1.2.1.25}}
 +
{{#set: gene associated=Tiso_gene_3260|Tiso_gene_11793}}
 +
{{#set: in pathway=VALDEG-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction 1.2.1.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-methyl-2-oxobutanoate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.2.1.25-RXN&oldid=40932"