Difference between revisions of "1.2.1.25-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7033 PWY-7033] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-2-oxobutanoa...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7033 PWY-7033] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.25-RXN 1.2.1.25-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** alkane biosynthesis II
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** 3-methyl-2-oxobutanoate_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1.25 EC-1.2.1.25]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN-7904]]
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** 1 [[CO-A]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ISOBUTYRYL-COA]][c]
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** 9 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_348]]
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** 1 coenzyme A[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 isobutanoyl-CoA[c]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_500]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_7855]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_10876]]
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* Gene: [[Tiso_gene_3260]]
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*** [[Tiso_gene_13394]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_9394]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_136]]
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* Gene: [[Tiso_gene_11793]]
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*** [[Tiso_gene_4191]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 reconstruction source(s) associated:
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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*** [[orthology-esiliculosus]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reaction(s) not found ==
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13273 RXN-13273]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13281 RXN-13281]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13997 13997]
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{{#set: common name=alkane biosynthesis II}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01210 R01210]
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{{#set: total reaction=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=33.0}}
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{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.25}}
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{{#set: gene associated=Tiso_gene_3260|Tiso_gene_11793}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction 1.2.1.25-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-methyl-2-oxobutanoate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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