Difference between revisions of "1.2.1.27-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.27-RXN 1.2.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semial...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-151 RXN1F-151] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.27-RXN 1.2.1.27-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** methylmalonate-semialdehyde_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
+
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD1F-126]][c] '''=>''' 1 [[CPD1F-129]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD-12179]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 γ-carotene[c] '''=>''' 1 all-trans-β-carotene[c]
+
** 1 coenzyme A[c] '''+''' 1 methylmalonate semialdehyde[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 propanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_4457]]
+
* Gene: [[Tiso_gene_11323]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
* Gene: [[Tiso_gene_1547]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[orthology-athaliana]]
+
−
* Gene: [[Tiso_gene_3577]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_11980]]
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Gene: [[Tiso_gene_6282]]
+
−
** Source: [[orthology-athaliana]]
+
−
* Gene: [[Tiso_gene_8263]]
+
−
** Source: [[orthology-athaliana]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
+
* [[PWY-5642]], 2,4-dinitrotoluene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5642 PWY-5642]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32242 32242]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03824 R03824]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00922 R00922]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q02253 Q02253]
 +
** [http://www.uniprot.org/uniprot/Q07536 Q07536]
 +
** [http://www.uniprot.org/uniprot/P28810 P28810]
 +
** [http://www.uniprot.org/uniprot/O49218 O49218]
 +
** [http://www.uniprot.org/uniprot/Q7KW39 Q7KW39]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-5.5.1.19}}
+
{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_4457|Tiso_gene_1547|Tiso_gene_3577|Tiso_gene_11980|Tiso_gene_6282|Tiso_gene_8263}}
+
{{#set: ec number=EC-1.2.1.27}}
−
{{#set: in pathway=PWY-5943}}
+
{{#set: gene associated=Tiso_gene_11323}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-5642}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:19, 21 March 2018

Reaction 1.2.1.27-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methylmalonate-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 methylmalonate semialdehyde[c] + 1 H2O[c] + 1 NAD+[c] => 1 H+[c] + 1 NADH[c] + 1 hydrogencarbonate[c] + 1 propanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5642, 2,4-dinitrotoluene degradation: PWY-5642
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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