Difference between revisions of "1.2.1.31-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_18744 == * left end position: ** 2624 * transcription direction: ** POSITIVE * right end position: ** 2795 * centisome position: ** 93.0166...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.31-RXN 1.2.1.31-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_18744 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.31-RXN 1.2.1.31-RXN] ==
−
* left end position:
+
* direction:
−
** 2624
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** polyketide_synthase
−
* right end position:
+
** ORF
−
** 2795
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.2.1.31 EC-1.2.1.31]
−
** 93.01666   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-10642]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[WATER]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[ALLYSINE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-468]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
−
***ec-number
+
* With common name(s):
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 H2O[c] '''+''' 1 NAD(P)+[c] '''+''' 1 (S)-2-amino-6-oxohexanoate[c] '''=>''' 2 H+[c] '''+''' 1 L-2-aminoadipate[c] '''+''' 1 NAD(P)H[c]
−
* [[UROGENDECARBOX-RXN]]
+
 
−
** in-silico_annotation
+
== Genes associated with this reaction  ==
−
***ec-number
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_6563]]
−
== Pathways associated ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [[HEMESYN2-PWY]]
+
*** Assignment: EC-NUMBER
−
* [[PWY0-1415]]
+
* Gene: [[Tiso_gene_5424]]
−
* [[HEME-BIOSYNTHESIS-II]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7766]]
+
*** Assignment: EC-NUMBER
−
* [[CHLOROPHYLL-SYN]]
+
* Gene: [[Tiso_gene_16719]]
−
* [[PWY-7159]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-5531]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2624}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12306 12306]
−
{{#set: right end position=2795}}
+
* LIGAND-RXN:
−
{{#set: centisome position=93.01666    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03103 R03103]
−
{{#set: reaction associated=RXN-10642|UROGENDECARBOX-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=HEMESYN2-PWY|PWY0-1415|HEME-BIOSYNTHESIS-II|PWY-7766|CHLOROPHYLL-SYN|PWY-7159|PWY-5531}}
+
** [http://www.uniprot.org/uniprot/P50113 P50113]
 +
** [http://www.uniprot.org/uniprot/P07702 P07702]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=polyketide_synthase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.2.1.31}}
 +
{{#set: gene associated=Tiso_gene_6563|Tiso_gene_5424|Tiso_gene_16719|Tiso_gene_5425|Tiso_gene_6562}}
 +
{{#set: in pathway=LYSINE-DEG1-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction 1.2.1.31-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.2.1.31-RXN&oldid=40044"