Difference between revisions of "1.5.1.20-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofo...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glycerophosphodiester degradation
+
** methylenetetrahydrofolate_reductase
 +
** -methylenetetrahydrofolate_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.5.1.20 EC-1.5.1.20]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''2''' reactions found over '''2''' reactions in the full pathway
+
* With identifiers:
−
* [[GLYCPDIESTER-RXN]]
+
** 1 [[NADH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[NAD]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_5334]]
+
** 1 NADH[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H+[c] '''=>''' 1 an N5-methyl-tetrahydrofolate[c] '''+''' 1 NAD+[c]
−
*** [[Tiso_gene_17232]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-in-silico_annotation]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXN-15745]]
+
* Gene: [[Tiso_gene_14582]]
−
** 1 associated gene(s):
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_15777]]
+
*** Assignment: EC-NUMBER
−
** 3 reconstruction source(s) associated:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[annotation-experimental_annotation]]
+
*** Assignment: EC-NUMBER
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_16954]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* LIGAND-RXN:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6952 PWY-6952]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07168 R07168]
−
{{#set: taxonomic range=TAX-2}}
+
* UNIPROT:
−
{{#set: common name=glycerophosphodiester degradation}}
+
** [http://www.uniprot.org/uniprot/Q9PN93 Q9PN93]
−
{{#set: reaction found=2}}
+
** [http://www.uniprot.org/uniprot/Q9JUT7 Q9JUT7]
−
{{#set: total reaction=2}}
+
** [http://www.uniprot.org/uniprot/P45208 P45208]
−
{{#set: completion rate=100.0}}
+
** [http://www.uniprot.org/uniprot/P0AEZ1 P0AEZ1]
 +
** [http://www.uniprot.org/uniprot/P11003 P11003]
 +
** [http://www.uniprot.org/uniprot/P46151 P46151]
 +
** [http://www.uniprot.org/uniprot/P53128 P53128]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=methylenetetrahydrofolate_reductase}}
 +
{{#set: common name=-methylenetetrahydrofolate_reductase}}
 +
{{#set: ec number=EC-1.5.1.20}}
 +
{{#set: gene associated=Tiso_gene_14582|Tiso_gene_16954}}
 +
{{#set: in pathway=PWY-2201|1CMET2-PWY|CODH-PWY|PWY-3841}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:12, 21 March 2018

Reaction 1.5.1.20-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methylenetetrahydrofolate_reductase
    • -methylenetetrahydrofolate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 7 reactions found over 12 reactions in the full pathway
  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.5.1.20-RXN&oldid=40188"