Difference between revisions of "1.5.1.7-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8778 == * left end position: ** 5952 * transcription direction: ** POSITIVE * right end position: ** 7610 * centisome position: ** 60.12121...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] ==
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== Gene Tiso_gene_8778 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5952
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.1.1.23 EC-4.1.1.23]
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** POSITIVE
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* right end position:
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** 7610
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* centisome position:
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** 60.121216   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[OROTIDINE-5-PHOSPHATE]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 orotidine 5'-phosphate[c] '''=>''' 1 UMP[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20050]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_18647]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
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** in-silico_annotation
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** '''6''' reactions found over '''6''' reactions in the full pathway
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***ec-number
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* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
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** [[pantograph]]-[[esiliculosus]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
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* [[PWY3O-246]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6386]]
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== Reconstruction information  ==
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* [[PWY-6387]]
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* [[orthology]]:
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* [[PWY-5951]]
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5952}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7610}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00965 R00965]
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{{#set: centisome position=60.121216    }}
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* UNIPROT:
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{{#set: reaction associated=RR-BUTANEDIOL-DEHYDROGENASE-RXN|UDPNACETYLMURAMATEDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/P11172 P11172]
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{{#set: pathway associated=PWY3O-246|PWY-6386|PWY-6387|PWY-5951}}
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** [http://www.uniprot.org/uniprot/Q9KQT7 Q9KQT7]
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** [http://www.uniprot.org/uniprot/Q9CFW9 Q9CFW9]
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** [http://www.uniprot.org/uniprot/P24220 P24220]
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** [http://www.uniprot.org/uniprot/P0A5M7 P0A5M7]
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** [http://www.uniprot.org/uniprot/P43812 P43812]
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** [http://www.uniprot.org/uniprot/Q9PIC1 Q9PIC1]
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** [http://www.uniprot.org/uniprot/P10652 P10652]
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** [http://www.uniprot.org/uniprot/P07817 P07817]
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** [http://www.uniprot.org/uniprot/P03962 P03962]
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** [http://www.uniprot.org/uniprot/P14017 P14017]
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** [http://www.uniprot.org/uniprot/P07691 P07691]
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** [http://www.uniprot.org/uniprot/P08244 P08244]
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** [http://www.uniprot.org/uniprot/P13439 P13439]
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** [http://www.uniprot.org/uniprot/P05035 P05035]
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** [http://www.uniprot.org/uniprot/P09463 P09463]
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** [http://www.uniprot.org/uniprot/P14964 P14964]
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** [http://www.uniprot.org/uniprot/P21593 P21593]
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** [http://www.uniprot.org/uniprot/P15188 P15188]
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** [http://www.uniprot.org/uniprot/P07922 P07922]
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** [http://www.uniprot.org/uniprot/P0A5M6 P0A5M6]
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** [http://www.uniprot.org/uniprot/Q9JV18 Q9JV18]
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** [http://www.uniprot.org/uniprot/P25971 P25971]
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** [http://www.uniprot.org/uniprot/P46535 P46535]
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** [http://www.uniprot.org/uniprot/P31754 P31754]
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** [http://www.uniprot.org/uniprot/P32430 P32430]
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** [http://www.uniprot.org/uniprot/Q01637 Q01637]
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** [http://www.uniprot.org/uniprot/P09556 P09556]
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** [http://www.uniprot.org/uniprot/P21594 P21594]
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** [http://www.uniprot.org/uniprot/Q06375 Q06375]
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** [http://www.uniprot.org/uniprot/P41769 P41769]
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** [http://www.uniprot.org/uniprot/Q18516 Q18516]
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** [http://www.uniprot.org/uniprot/Q59654 Q59654]
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** [http://www.uniprot.org/uniprot/Q42586 Q42586]
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** [http://www.uniprot.org/uniprot/P48844 P48844]
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** [http://www.uniprot.org/uniprot/P43230 P43230]
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** [http://www.uniprot.org/uniprot/Q42942 Q42942]
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** [http://www.uniprot.org/uniprot/O74110 O74110]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.1.23}}
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{{#set: gene associated=Tiso_gene_20050|Tiso_gene_18647}}
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{{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:10, 10 January 2018

Gene Tiso_gene_8778

  • left end position:
    • 5952
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7610
  • centisome position:
    • 60.121216
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.5.1.7-RXN&oldid=16534"