Difference between revisions of "1.5.5.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-ketoacyl-_thiolase ** ace...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEPHOSPHOCOAKIN-RXN DEPHOSPHOCOAKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dephosp...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17799 RXN-17799] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEPHOSPHOCOAKIN-RXN DEPHOSPHOCOAKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-ketoacyl-_thiolase
+
** dephospho-_kinase
−
** acetyl-_c-acetyltransferase
+
−
** thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/2.7.1.24 EC-2.7.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-19153]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-14925]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[DEPHOSPHO-COA]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-(5Z)-dodecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 3-cis-decenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 ATP[c] '''+''' 1 3'-dephospho-CoA[c] '''=>''' 1 ADP[c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15327]]
+
* [[Tiso_gene_19719]]
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** [[pantograph]]-[[synechocystis]]
−
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[synechocystis]]
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18245 18245]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00130 R00130]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: common name=dephospho-_kinase}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: ec number=EC-2.7.1.24}}
−
{{#set: common name=thiolase}}
+
{{#set: gene associated=Tiso_gene_19719}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: in pathway=COA-PWY|COA-PWY-1}}
−
{{#set: gene associated=Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_10116}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=synechocystis|esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:39, 10 January 2018

Reaction DEPHOSPHOCOAKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dephospho-_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 3'-dephospho-CoA[c] => 1 ADP[c] + 1 coenzyme A[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • COA-PWY, coenzyme A biosynthesis I: COA-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • COA-PWY-1, coenzyme A biosynthesis II (mammalian): COA-PWY-1
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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