Difference between revisions of "1.8.3.5-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-Oxo-Delta-4-Steroids 3-Oxo-Delta-4-Steroids] == * common name: ** a 3-oxo-Δ4-steroid *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phospho...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-Oxo-Delta-4-Steroids 3-Oxo-Delta-4-Steroids] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a 3-oxo-Δ4-steroid
+
** thymidine_phosphorylase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[GMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ADP]][c]
−
* [[RXN-13682]]
+
* With common name(s):
−
* [[1.3.99.5-RXN]]
+
** 1 GMP[c] '''+''' 1 ATP[c] '''=>''' 1 GDP[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_12554]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_1011]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4560]]
 +
** [[pantograph]]-[[athaliana]]
 +
* [[Tiso_gene_15049]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 3-oxo-Δ4-steroid}}
+
* RHEA:
−
{{#set: consumed or produced by=RXN-13682|1.3.99.5-RXN}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
 +
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
 +
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
 +
** [http://www.uniprot.org/uniprot/P44310 P44310]
 +
** [http://www.uniprot.org/uniprot/P15454 P15454]
 +
** [http://www.uniprot.org/uniprot/P60546 P60546]
 +
** [http://www.uniprot.org/uniprot/P31006 P31006]
 +
** [http://www.uniprot.org/uniprot/P46195 P46195]
 +
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
 +
** [http://www.uniprot.org/uniprot/P72648 P72648]
 +
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
 +
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=thymidine_phosphorylase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-2.7.4.8}}
 +
{{#set: gene associated=Tiso_gene_12554|Tiso_gene_1011|Tiso_gene_4560|Tiso_gene_15049}}
 +
{{#set: in pathway=PWY-7221}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-athaliana|orthology-esiliculosus|orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:00, 18 March 2018

Reaction GUANYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GMP[c] + 1 ATP[c] => 1 GDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.8.3.5-RXN&oldid=21255"