Difference between revisions of "2-3-CARBOXY-3-METHYLAMMONIOPROPYL-L-"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPMANDEHYDRA-RXN GDPMANDEHYDRA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-mannose...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18210 RXN-18210] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydrogenas...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPMANDEHYDRA-RXN GDPMANDEHYDRA-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18210 RXN-18210] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** GDP-mannose 4,6-dehydratase
+
** 3-isopropylmalate dehydrogenase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.2.1.47 EC-4.2.1.47]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[CPD-1130]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-19492]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 GDP-&alpha;-D-mannose[c] '''=>''' 1 GDP-4-dehydro-&alpha;-D-rhamnose[c] '''+''' 1 H2O[c]
+
** 1 3-ethylmalate[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-ethyl-2-oxosuccinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13093]]
+
* Gene: [[Tiso_gene_2920]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
−
* [[Tiso_gene_13092]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[GDPRHAMSYN-PWY]], GDP-D-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=GDPRHAMSYN-PWY GDPRHAMSYN-PWY]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-66]], GDP-L-fucose biosynthesis I (from GDP-D-mannose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-66 PWY-66]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5740]], GDP-L-colitose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5740 PWY-5740]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7573]], GDP-mycosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7573 PWY-7573]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5738]], GDP-6-deoxy-D-talose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5738 PWY-5738]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5739]], GDP-D-perosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5739 PWY-5739]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23820 23820]
+
{{#set: common name=3-isopropylmalate dehydrogenase}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_2920}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00888 R00888]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q84439 Q84439]
+
{{#set: reconstruction source=annotation-experimental_annotation}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: common name=GDP-mannose 4,6-dehydratase}}
+
−
{{#set: ec number=EC-4.2.1.47}}
+
−
{{#set: gene associated=Tiso_gene_13093|Tiso_gene_13092}}
+
−
{{#set: in pathway=GDPRHAMSYN-PWY|PWY-66|PWY-5740|PWY-7573|PWY-5738|PWY-5739}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:45, 21 March 2018

Reaction RXN-18210

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-ethylmalate[c] + 1 NAD+[c] <=> 1 H+[c] + 1 NADH[c] + 1 3-ethyl-2-oxosuccinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2-3-CARBOXY-3-METHYLAMMONIOPROPYL-L-&oldid=36051"