Difference between revisions of "2-DEOXYRIBOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP reductase ** ri...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] == * smiles: ** C(O)C(O)C(O)CC=O * common name: ** 2'-deoxyribose...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-DEOXYRIBOSE 2-DEOXYRIBOSE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(O)C(O)C(O)CC=O
 
* common name:
 
* common name:
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** ADP reductase
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** 2'-deoxyribose
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** ribonucleoside-diphosphate_reductase
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* inchi key:
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* ec number:
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** InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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* molecular weight:
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** 134.132   
 
* Synonym(s):
 
* Synonym(s):
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** deoxyribose
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** 2-deoxyribose
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** 2-deoxy-D-ribose
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[ADP]][c] '''=>''' 1 [[DADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-14223]]
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** 1 a reduced thioredoxin[c] '''+''' 1 ADP[c] '''=>''' 1 dADP[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10617]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9916]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10138]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9915]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 533-67-5
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10786 10786]
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** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
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* HMDB : HMDB03224
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=ADP reductase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01801 C01801]
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{{#set: common name=ribonucleoside-diphosphate_reductase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-1.17.4.1}}
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** [http://www.chemspider.com/Chemical-Structure.10330.html 10330]
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{{#set: gene associated=Tiso_gene_10617|Tiso_gene_9916|Tiso_gene_10138|Tiso_gene_9915}}
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* CHEBI:
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{{#set: in pathway=PWY-7220|PWY-7227}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=131350 131350]
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{{#set: reconstruction category=orthology}}
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* METABOLIGHTS : MTBLC28816
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=C(O)C(O)C(O)CC=O}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: common name=2'-deoxyribose}}
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{{#set: reconstruction category=manual}}
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{{#set: inchi key=InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N}}
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{{#set: reconstruction source=primary_network}}
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{{#set: molecular weight=134.132    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=deoxyribose|2-deoxyribose|2-deoxy-D-ribose}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reversible reaction associated=RXN-14223}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:24, 21 March 2018

Metabolite 2-DEOXYRIBOSE

  • smiles:
    • C(O)C(O)C(O)CC=O
  • common name:
    • 2'-deoxyribose
  • inchi key:
    • InChIKey=ASJSAQIRZKANQN-UHFFFAOYSA-N
  • molecular weight:
    • 134.132
  • Synonym(s):
    • deoxyribose
    • 2-deoxyribose
    • 2-deoxy-D-ribose

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 533-67-5
  • PUBCHEM:
  • HMDB : HMDB03224
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC28816




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